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L3_072_000M1_scaffold_301

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_301_1
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

3..1322
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ILH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42945.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
putative efflux protein, MATE family
L3_072_000M1_scaffold_301_2
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists


comp(1379..2797)
DNA (1419bp) protein (473aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
tyrS; prolyl-tRNA synthetase (EC:6.1.1.1)
Proline--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D6W1_9FIRM
L3_072_000M1_scaffold_301_3
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2934..4319)
DNA (1386bp) protein (462aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00015859}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
pyridoxal-phosphate dependent TrpB-like enzyme (EC:4.2.1.20)
Pyridoxal-phosphate dependent TrpB-like enzyme n=2 Tax=Clostridium RepID=A7VEV5_9CLOT
L3_072_000M1_scaffold_301_4
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(4351..5394)
DNA (1044bp) protein (348aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DW50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82192.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_072_000M1_scaffold_301_5
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(5757..6626)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DVX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82107.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_072_000M1_scaffold_301_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

6741..7367
DNA (627bp) protein (209aa)
Single-strand binding family protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CYW4_9FIRM
Single-strand binding family protein {ECO:0000313|EMBL:CCX73063.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ssb; putative single-stranded DNA-binding protein
L3_072_000M1_scaffold_301_7
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

7430..8830
DNA (1401bp) protein (467aa)
Putative efflux protein MATE family n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAW5_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDA82109.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
efflux protein
L3_072_000M1_scaffold_301_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

8831..9001
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D2S1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82110.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_072_000M1_scaffold_301_9
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(9038..9880)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CWV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81068.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_072_000M1_scaffold_301_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(9887..10780)
DNA (894bp) protein (298aa)
Transporter small conductance mechanosensitive ion channel family n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D7V2_9FIRM
Transporter small conductance mechanosensitive ion channel family {ECO:0000313|EMBL:CDA81069.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
similar to small-conductance mechanosensitive channel protein
L3_072_000M1_scaffold_301_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10957..17199)
DNA (6243bp) protein (2081aa)
Immunoglobulin I-set domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FXD4_9FIRM
putative extracellular nuclease
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:EEG92701.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_072_000M1_scaffold_301_12
unknown

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comp(17245..17382)
DNA (138bp) protein (46aa)

This feature has no annotations

L3_072_000M1_scaffold_301_13
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(17402..17734)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S7Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46944.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_072_000M1_scaffold_301_14
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

17919..18641
DNA (723bp) protein (241aa)
Two component transcriptional regulator LytTR family n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SIN2_9FIRM
Two component transcriptional regulator LytTR family {ECO:0000313|EMBL:CCZ46551.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
response regulator of the LytR/AlgR family
L3_072_000M1_scaffold_301_15
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18638..19945
DNA (1308bp) protein (436aa)
Signal transduction histidine kinase regulating citrate/malate metabolism n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RA68_CLOSW
signal transduction histidine kinase regulating citrate/malate metabolism
Signal transduction histidine kinase regulating citrate/malate metabolism {ECO:0000313|EMBL:ADL06040.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000M1_scaffold_301_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20019..20570)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJI5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55998.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_072_000M1_scaffold_301_17
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20635..22590)
DNA (1956bp) protein (652aa)
Putative peptidase C11 family protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R8Y3_9FIRM
Putative peptidase C11 family protein {ECO:0000313|EMBL:CDF46180.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
putative peptidase C11 family protein
L3_072_000M1_scaffold_301_18
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(22592..23548)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IV61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40596.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L3_072_000M1_scaffold_301_19
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23804..24067
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M7M8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66701.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
small acid-soluble spore protein
L3_072_000M1_scaffold_301_20
Yersinia enterocolitica, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24449..25201
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1DXM1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM75432.1}; TaxID=1443113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia enterocolitica LC20.;"
L3_072_000M1_scaffold_301_21
Streptococcus sanguinis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25244..26008
DNA (765bp) protein (255aa)
Type II restriction enzyme SinI {ECO:0000313|EMBL:EGD37519.1}; EC=3.1.21.4 {ECO:0000313|EMBL:EGD37519.1};; TaxID=888811 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sanguinis SK150.;"
Uncharacterized protein n=1 Tax=Streptococcus agalactiae SS1014 RepID=M1Y8Z2_STRAG
type II restriction endonuclease SinI
L3_072_000M1_scaffold_301_22
Streptococcus constellatus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26393..27814)
DNA (1422bp) protein (474aa)
Cytosine-specific methyltransferase n=1 Tax=Streptococcus agalactiae SS1014 RepID=M1XVP5_STRAG
Uncharacterized protein {ECO:0000313|EMBL:GAD38159.1}; TaxID=1095730 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus constellatus subsp. constellatus SK53.;"
DNA-methyltransferase
L3_072_000M1_scaffold_301_23
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28061..28936)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H2K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27716.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_072_000M1_scaffold_301_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28926..31964)
DNA (3039bp) protein (1013aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QYC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK62564.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
phage-related hypothetical protein
L3_072_000M1_scaffold_301_25
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

32115..33176
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ASW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46038.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_072_000M1_scaffold_301_26
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33387..33713
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R0E8_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL06381.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000M1_scaffold_301_27
unknown

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34459..35034
DNA (576bp) protein (192aa)

This feature has no annotations

L3_072_000M1_scaffold_301_28
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

35332..35502
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6M0X7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88056.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_072_000M1_scaffold_301_29
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

35623..37368
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MQH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88057.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_072_000M1_scaffold_301_30
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37430..38179)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LVX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62955.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
Displaying items 1-30 of 53 in total

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