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L3_072_000M1_scaffold_316

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_316_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

798..1220
DNA (423bp) protein (141aa)
Large-conductance mechanosensitive channel n=2 Tax=Parabacteroides RepID=K5Z723_9PORP
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
large conductance mechanosensitive channel protein
L3_072_000M1_scaffold_316_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1341..2201)
DNA (861bp) protein (287aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Methionine aminopeptidase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z6A1_9PORP
methionine aminopeptidase A
L3_072_000M1_scaffold_316_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2235..3245)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AD02_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86944.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transmembrane protein
L3_072_000M1_scaffold_316_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3319..4179)
DNA (861bp) protein (287aa)
Phospholipase A1 n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WLP8_9PORP
Phospholipase A1 {ECO:0000313|EMBL:CDD12058.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
outer membrane phospholipase A
L3_072_000M1_scaffold_316_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4302..6128
DNA (1827bp) protein (609aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5YV07_9PORP
MutS domain V protein {ECO:0000313|EMBL:CDD12057.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
DNA mismatch repair protein MutS
L3_072_000M1_scaffold_316_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6601..7398)
DNA (798bp) protein (266aa)
Peptidase, M48 family n=3 Tax=Parabacteroides merdae RepID=A7AD06_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06900.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Zn-dependent protease with chaperone function
L3_072_000M1_scaffold_316_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7521..8024
DNA (504bp) protein (168aa)
Arginine repressor n=2 Tax=Parabacteroides merdae RepID=K5Z6A7_9PORP
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
arginine repressor, transcriptional regulator of arginine metabolism
L3_072_000M1_scaffold_316_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8095..8676
DNA (582bp) protein (194aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AD08_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86950.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_316_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8719..9918
DNA (1200bp) protein (400aa)
Argininosuccinate synthase n=4 Tax=Parabacteroides RepID=K5ZU05_9PORP
Putative argininosuccinate synthase {ECO:0000313|EMBL:CDD12047.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
argininosuccinate synthase
L3_072_000M1_scaffold_316_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9915..10883
DNA (969bp) protein (323aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=3 Tax=Parabacteroides merdae RepID=A7AD10_9PORP
L3_072_000M1_scaffold_316_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11062..12189
DNA (1128bp) protein (376aa)
Aminotransferase class III n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WRQ8_9PORP
Aminotransferase class III {ECO:0000313|EMBL:CDD12045.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
acetylornithine aminotransferase
L3_072_000M1_scaffold_316_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12337..12843)
DNA (507bp) protein (169aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYU3_9PORP
FKBP-type peptidyl-prolyl cis-trans isomerase
L3_072_000M1_scaffold_316_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12916..15204)
DNA (2289bp) protein (763aa)
Bacterial alpha-L-rhamnosidase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WLN7_9PORP
Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:CDD12043.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
alpha-L-rhamnosidase
L3_072_000M1_scaffold_316_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15333..16631)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y0Q3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12042.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_072_000M1_scaffold_316_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16752..19061
DNA (2310bp) protein (770aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5YV16_9PORP
Peptidase S9A/B/C family catalytic domain protein {ECO:0000313|EMBL:CDD12041.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
dipeptidyl aminopeptidase
L3_072_000M1_scaffold_316_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19149..19718
DNA (570bp) protein (190aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AD17_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86959.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_316_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19830..21047)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z6B5_9PORP
Peptidase C1-like family {ECO:0000313|EMBL:CDD12039.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
aminopeptidase
L3_072_000M1_scaffold_316_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21182..21988
DNA (807bp) protein (269aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Pyrroline-5-carboxylate reductase n=4 Tax=Parabacteroides RepID=K5Y1H6_9PORP
pyrroline-5-carboxylate reductase
L3_072_000M1_scaffold_316_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22157..22420)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6A0N3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06913.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_072_000M1_scaffold_316_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22541..23719)
DNA (1179bp) protein (393aa)
Proline dehydrogenase n=3 Tax=Parabacteroides RepID=A7AD21_9PORP
Proline dehydrogenase {ECO:0000313|EMBL:EDN86963.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
proline dehydrogenase
L3_072_000M1_scaffold_316_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23864..25495)
DNA (1632bp) protein (544aa)
1-pyrroline-5-carboxylate dehydrogenase n=3 Tax=Parabacteroides merdae RepID=A7AD22_9PORP
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:EDN86964.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
delta-1-pyrroline-5-carboxylate dehydrogenase
L3_072_000M1_scaffold_316_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25692..25880
DNA (189bp) protein (63aa)
4Fe-4S binding domain protein n=4 Tax=Parabacteroides RepID=A7AD23_9PORP
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDN86965.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
L3_072_000M1_scaffold_316_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26142..26696
DNA (555bp) protein (185aa)
Cupin domain protein n=3 Tax=Parabacteroides RepID=A7AD25_9PORP
Cupin domain protein {ECO:0000313|EMBL:CDD14439.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transcriptional regulator
L3_072_000M1_scaffold_316_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26715..28385
DNA (1671bp) protein (557aa)
AMP-binding enzyme n=4 Tax=Parabacteroides RepID=A7AD26_9PORP
AMP-binding enzyme {ECO:0000313|EMBL:CDD14440.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
acetyl-coenzyme A synthetase
L3_072_000M1_scaffold_316_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28363..29487
DNA (1125bp) protein (375aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase n=2 Tax=Parabacteroides merdae RepID=A7AD27_9PORP
L3_072_000M1_scaffold_316_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29507..30751
DNA (1245bp) protein (415aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Gamma-glutamyl phosphate reductase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y7S4_9PORP
proA; gamma-glutamyl phosphate reductase
L3_072_000M1_scaffold_316_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30871..31836
DNA (966bp) protein (322aa)
N-acetylornithine carbamoyltransferase n=4 Tax=Parabacteroides RepID=A7AD29_9PORP
N-acetylornithine carbamoyltransferase {ECO:0000313|EMBL:EKN06921.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ornithine carbamoyltransferase
L3_072_000M1_scaffold_316_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31868..33967)
DNA (2100bp) protein (700aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Y1I4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06922.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
TonB-dependent receptor
L3_072_000M1_scaffold_316_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34057..34287)
DNA (231bp) protein (77aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AD31_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14445.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_316_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34444..36108)
DNA (1665bp) protein (555aa)
AMP-binding enzyme n=3 Tax=Parabacteroides merdae RepID=A7AD32_9PORP
AMP-binding enzyme {ECO:0000313|EMBL:EDN86974.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
long-chain-fatty-acid-CoA ligase
Displaying items 1-30 of 49 in total

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