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L3_072_000M1_scaffold_319

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_319_1
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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122..1726
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
phosphoenolpyruvate carboxykinase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031EE0BB
ATP-dependent phosphoenolpyruvate carboxykinase
L3_072_000M1_scaffold_319_2
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2482..3369
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000368A7C2
DNA-binding domain-containing protein
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFR58603.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_072_000M1_scaffold_319_3
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3428..4801)
DNA (1374bp) protein (458aa)
FAD binding protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FB6175
FAD binding protein
FAD binding protein {ECO:0000313|EMBL:AFL78074.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_319_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4971..5969)
DNA (999bp) protein (333aa)
fructose-bisphosphate aldolase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E77D8E
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CDD25533.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
fructose-1,6-bisphosphate aldolase
L3_072_000M1_scaffold_319_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6437..8050
DNA (1614bp) protein (538aa)
hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily (EC:4.2.1.2)
fumarate hydratase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F98594
Hydro-lyase Fe-S type tartrate/fumarate subfamily hydro-lyase family enzyme Fe-S type tartrate/fumarate subfamily {ECO:0000313|EMBL:CDD25532.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_072_000M1_scaffold_319_6
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8184..10016
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000374A474
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77524.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_319_7
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10023..10865
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000311CB82
DNA uptake lipoprotein {ECO:0000313|EMBL:CDC96704.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
DNA uptake lipoprotein
L3_072_000M1_scaffold_319_8
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10924..11520
DNA (597bp) protein (199aa)
recombinase RecR n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030666C1
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
DNA replication and repair protein RecR
L3_072_000M1_scaffold_319_9
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11649..12461)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031ACC29
Conserved domain protein {ECO:0000313|EMBL:CDB82223.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
hypothetical protein
L3_072_000M1_scaffold_319_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12775..14121)
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030BA23B
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Na+-dependent transporters of the SNF family
L3_072_000M1_scaffold_319_11
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14330..14683)
DNA (354bp) protein (118aa)
dihydroneopterin aldolase (EC:4.1.2.25)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D3FC5B
Dihydroneopterin aldolase {ECO:0000313|EMBL:CDE63476.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_072_000M1_scaffold_319_12
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14748..16040)
DNA (1293bp) protein (431aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
tyrosyl-tRNA synthetase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003064C8E
L3_072_000M1_scaffold_319_13
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16074..17981)
DNA (1908bp) protein (636aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EDS02833.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EDS02833.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
DNA polymerase III, subunit gamma and tau n=3 Tax=root RepID=B0MYZ7_9BACT
DNA polymerase III subunits gamma and tau
L3_072_000M1_scaffold_319_14
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18049..18954)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031F8B79
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77502.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_319_15
Prevotella sp. CAG:592, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19011..19982
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037BDA5D
Putative glycosyltransferase {ECO:0000313|EMBL:CDD06350.1}; TaxID=1262931 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:592.;"
glycosyltransferase
L3_072_000M1_scaffold_319_16
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20043..21185)
DNA (1143bp) protein (381aa)
alcohol dehydrogenase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003079613
iron-containing alcohol dehydrogenase
Alcohol dehydrogenase YqhD {ECO:0000313|EMBL:EFI02853.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
L3_072_000M1_scaffold_319_17
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21271..22950)
DNA (1680bp) protein (560aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003755073
Uncharacterized protein {ECO:0000313|EMBL:GAK35650.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
Calcineurin-like phosphoesterase.
L3_072_000M1_scaffold_319_18
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23133..25733)
DNA (2601bp) protein (867aa)
molecular chaperone ClpB n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037F40D1
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
ATP-dependent chaperone ClpB
L3_072_000M1_scaffold_319_19
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25984..26631)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003038190
CMP-N-acetylneuraminic acid synthetase {ECO:0000313|EMBL:CDC97736.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
CMP-N-acetylneuraminic acid synthetase
L3_072_000M1_scaffold_319_20
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26645..27610)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030D06FA
Uncharacterized protein {ECO:0000313|EMBL:EDS04712.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Acyl-protein synthetase, LuxE
L3_072_000M1_scaffold_319_21
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27823..28296)
DNA (474bp) protein (158aa)
translation initiation factor IF-3 n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000380F900
Translation initiation factor IF-3 {ECO:0000313|EMBL:CDE64895.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
translation initiation factor IF-3
L3_072_000M1_scaffold_319_22
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28554..30503)
DNA (1950bp) protein (650aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
threonyl-tRNA synthetase (EC:6.1.1.3)
threonyl-tRNA synthetase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DC2D46
L3_072_000M1_scaffold_319_23
unknown

Not on your lists

comp(30668..30862)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031D954D
L3_072_000M1_scaffold_319_24
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30882..31982)
DNA (1101bp) protein (367aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F2761B
L3_072_000M1_scaffold_319_25
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32319..33296
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KRB1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOR98462.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
L3_072_000M1_scaffold_319_26
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33514..34266)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003168A1F
rRNA methylases {ECO:0000313|EMBL:CCZ95787.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
rRNA methylases
L3_072_000M1_scaffold_319_27
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34260..35192)
DNA (933bp) protein (311aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
ribonuclease Z n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E64AB6
beta-lactamase superfamily metal-dependent hydrolase
L3_072_000M1_scaffold_319_28
unknown

Not on your lists

comp(35423..35755)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000306E5E1
L3_072_000M1_scaffold_319_29
unknown

Not on your lists

comp(35789..36127)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F6AE54
L3_072_000M1_scaffold_319_30
unknown

Not on your lists

comp(36163..36525)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003164F22
Displaying items 1-30 of 44 in total

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