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L3_072_000M1_scaffold_365

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_365_1
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..97)
DNA (96bp) protein (32aa)
50S ribosomal protein L3 n=1 Tax=Alistipes sp. CAG:29 RepID=R6XQG6_9BACT
50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_365_2
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(258..563)
DNA (306bp) protein (102aa)
30S ribosomal protein S10 n=6 Tax=root RepID=D4IMJ2_9BACT
SSU ribosomal protein S10P
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_365_3
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(573..2684)
DNA (2112bp) protein (704aa)
Elongation factor G n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSI2_9BACT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
translation elongation factor EF-G
L3_072_000M1_scaffold_365_4
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2701..3177)
DNA (477bp) protein (159aa)
30S ribosomal protein S7 n=3 Tax=root RepID=B0MSI1_9BACT
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
SSU ribosomal protein S7P
L3_072_000M1_scaffold_365_5
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3217..3621)
DNA (405bp) protein (135aa)
30S ribosomal protein S12 n=3 Tax=root RepID=B0MSI0_9BACT
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
30S ribosomal protein S12
L3_072_000M1_scaffold_365_6
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4467..7223
DNA (2757bp) protein (919aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JPR6_9BACT
L3_072_000M1_scaffold_365_7
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7299..7667)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JMP9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE64863.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_072_000M1_scaffold_365_8
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7679..8167)
DNA (489bp) protein (163aa)
Flavodoxin n=2 Tax=Alistipes RepID=R7JLS9_9BACT
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
flavodoxin
L3_072_000M1_scaffold_365_9
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8505..9590
DNA (1086bp) protein (362aa)
Peptide chain release factor 1 n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JLT2_9BACT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
peptide chain release factor 1
L3_072_000M1_scaffold_365_10
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9603..9908
DNA (306bp) protein (102aa)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein {ECO:0000313|EMBL:EDS04745.1}; EC=2.1.1.63 {ECO:0000313|EMBL:EDS04745.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
6-O-methylguanine DNA methyltransferase, DNA binding domain protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSL9_9BACT
O(6)-alkylguanine repair protein YbaZ
L3_072_000M1_scaffold_365_11
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9956..10501
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=root RepID=B0MSL8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04744.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Gram-negative bacterial tonB protein.
L3_072_000M1_scaffold_365_12
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10524..11426
DNA (903bp) protein (301aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
1,4-dihydroxy-2-naphthoate prenyltransferase (EC:2.5.1.74)
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=2 Tax=root RepID=B0MSL7_9BACT
L3_072_000M1_scaffold_365_13
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11906..13132
DNA (1227bp) protein (409aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Exodeoxyribonuclease 7 large subunit n=2 Tax=root RepID=B0MSN1_9BACT
exonuclease VII, large subunit
L3_072_000M1_scaffold_365_14
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13146..13334
DNA (189bp) protein (63aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00198686};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Exonuclease VII small subunit. (EC:3.1.11.6)
Uncharacterized protein n=4 Tax=root RepID=B0MSN0_9BACT
L3_072_000M1_scaffold_365_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13336..14115
DNA (780bp) protein (260aa)
Methyltransferase domain protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JMI4_9BACT
Methyltransferase domain protein {ECO:0000313|EMBL:CDE64871.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
methylase
L3_072_000M1_scaffold_365_16
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14097..14981)
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSM8_9BACT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDS04738.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
putative AraC-family transcriptional regulator
L3_072_000M1_scaffold_365_17
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15084..15746
DNA (663bp) protein (221aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180, ECO:0000256|SAAS:SAAS00038056}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180, ECO:0000256|SAAS:SAAS00037921};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSM7_9BACT
putative 3,4-dihydroxy-2-butanone 4-phosphate/shikimate 5-dehydrogenase fusion protein
L3_072_000M1_scaffold_365_18
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16016..17815)
DNA (1800bp) protein (600aa)
30S ribosomal protein S1 n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSM6_9BACT
30S ribosomal protein S1 {ECO:0000313|EMBL:EDS04736.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
30S ribosomal protein S1
L3_072_000M1_scaffold_365_19
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17956..18897)
DNA (942bp) protein (314aa)
Putative membrane protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JLT8_9BACT
Putative membrane protein {ECO:0000313|EMBL:CDE64874.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L3_072_000M1_scaffold_365_20
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19142..20593)
DNA (1452bp) protein (484aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases (EC:3.1.3.5)
Ser/Thr phosphatase family protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JLT9_9BACT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDE64875.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_072_000M1_scaffold_365_21
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20651..22336
DNA (1686bp) protein (562aa)
Uridine kinase (EC:2.7.1.48)
Phosphoribulokinase/uridine kinase family protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSL3_9BACT
Phosphoribulokinase/uridine kinase family protein {ECO:0000313|EMBL:EDS04733.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_072_000M1_scaffold_365_22
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22391..25219
DNA (2829bp) protein (943aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Glycine dehydrogenase n=3 Tax=root RepID=B0MSL2_9BACT
glycine dehydrogenase, decarboxylating
L3_072_000M1_scaffold_365_23
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25294..25827)
DNA (534bp) protein (178aa)
Uncharacterized protein n=4 Tax=root RepID=B0MSL1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE64879.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_072_000M1_scaffold_365_24
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25941..26501
DNA (561bp) protein (187aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Peptidyl-prolyl cis-trans isomerase n=4 Tax=root RepID=B0MSL0_9BACT
FKBP-type peptidyl-prolyl cis-trans isomerase
L3_072_000M1_scaffold_365_25
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26603..27760
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSK9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04729.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
unusual protein kinase
L3_072_000M1_scaffold_365_26
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28179..29906
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSK7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04728.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_072_000M1_scaffold_365_27
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29906..30760
DNA (855bp) protein (285aa)
Uncharacterized protein n=2 Tax=root RepID=B0MSK6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04726.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_072_000M1_scaffold_365_28
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30765..31766
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JLU6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE64884.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_072_000M1_scaffold_365_29
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31788..32708
DNA (921bp) protein (307aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Thioredoxin reductase n=2 Tax=root RepID=R7JMJ8_9BACT
thioredoxin-disulfide reductase
L3_072_000M1_scaffold_365_30

Not on your lists

32982..33185
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=root RepID=B0MU02_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKC71279.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying items 1-30 of 51 in total

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