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L3_072_000M1_scaffold_371

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_371_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45..197)
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AIE9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85166.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_072_000M1_scaffold_371_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

230..1519
DNA (1290bp) protein (430aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIF0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85167.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_371_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1579..1950)
DNA (372bp) protein (124aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIF1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85168.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_371_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2075..3673)
DNA (1599bp) protein (533aa)
Glycosyl hydrolase family 20, catalytic domain protein n=3 Tax=Parabacteroides RepID=A7AIF3_9PORP
Glycosyl hydrolase family 20 catalytic domain protein {ECO:0000313|EMBL:CDD11249.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
beta-N-acetylhexosaminidase
L3_072_000M1_scaffold_371_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4185..4313)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJD7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11248.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_072_000M1_scaffold_371_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4573..5772)
DNA (1200bp) protein (400aa)
Glycosyl hydrolase, family 88 n=3 Tax=Parabacteroides RepID=A7AIF7_9PORP
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:CDD11247.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glucuronyl hydrolase
L3_072_000M1_scaffold_371_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5775..7634)
DNA (1860bp) protein (620aa)
Heparinase II/III-like protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPD5_9PORP
Heparinase II/III-like protein {ECO:0000313|EMBL:CDD11245.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
heparinase II/III family protein
L3_072_000M1_scaffold_371_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7651..10848)
DNA (3198bp) protein (1066aa)
Polysaccharide lyase family 8 super-sandwich domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWC9_9PORP
Polysaccharide lyase family 8 super-sandwich domain protein {ECO:0000313|EMBL:CDD11244.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
polysaccharide lyase 8
L3_072_000M1_scaffold_371_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10882..13539)
DNA (2658bp) protein (886aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJD3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11243.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_371_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13547..15628)
DNA (2082bp) protein (694aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XYC0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11242.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_371_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15745..16737)
DNA (993bp) protein (331aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIG2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85179.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_371_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16753..17256)
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AIG3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85180.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_371_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17274..19163)
DNA (1890bp) protein (630aa)
SusD family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWC2_9PORP
SusD family protein {ECO:0000313|EMBL:CDD11239.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RagB/SusD domain-containing protein
L3_072_000M1_scaffold_371_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19175..22582)
DNA (3408bp) protein (1136aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Parabacteroides RepID=A7AIG5_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDN85182.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
TonB-dependent receptor plug
L3_072_000M1_scaffold_371_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22739..23776)
DNA (1038bp) protein (346aa)
Sigma factor regulatory protein FecR/PupR family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X4P5_9PORP
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDD11236.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
anti-sigma factor
L3_072_000M1_scaffold_371_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23978..24532
DNA (555bp) protein (185aa)
RNA polymerase sigma-70 factor n=3 Tax=Parabacteroides RepID=A7AIG7_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDD11235.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RNA polymerase ECF-type sigma factor
L3_072_000M1_scaffold_371_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24781..27597
DNA (2817bp) protein (939aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11234.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_371_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27932..28531)
DNA (600bp) protein (200aa)
Peptidase S54 family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XF86_9PORP
Peptidase S54 family {ECO:0000313|EMBL:CDD14986.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_371_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28548..28718
DNA (171bp) protein (57aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K5ZQN0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14987.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_072_000M1_scaffold_371_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28688..30127
DNA (1440bp) protein (480aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Phospholipase D domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WUJ0_9PORP
cardiolipin synthetase
L3_072_000M1_scaffold_371_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30099..30656)
DNA (558bp) protein (186aa)
RNA methyltransferase RsmD family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7C0_9PORP
RNA methyltransferase RsmD family {ECO:0000313|EMBL:CDD14989.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
methyltransferase
L3_072_000M1_scaffold_371_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30644..31471)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X0B8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14990.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_371_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31480..32109)
DNA (630bp) protein (210aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIH4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85191.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_371_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32203..33630
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y9A3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14992.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
exonuclease V subunit alpha
L3_072_000M1_scaffold_371_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33762..33980)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B2Z1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13812.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_072_000M1_scaffold_371_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34072..34773
DNA (702bp) protein (234aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AIH6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85193.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_371_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34856..35560
DNA (705bp) protein (235aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Ribosomal RNA small subunit methyltransferase I n=4 Tax=Parabacteroides RepID=A7AIH7_9PORP
methyltransferase
L3_072_000M1_scaffold_371_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35579..36451
DNA (873bp) protein (291aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K6A604_9PORP
Putative gas vesicle protein GvpC repeat protein {ECO:0000313|EMBL:EDN85195.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_371_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36448..37143
DNA (696bp) protein (232aa)
HAD hydrolase, TIGR02254 family n=4 Tax=Parabacteroides RepID=A7AIH9_9PORP
HAD hydrolase TIGR02254 family {ECO:0000313|EMBL:CDD15022.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
HAD superfamily hydrolase
L3_072_000M1_scaffold_371_30
unknown

Not on your lists

37237..37626
DNA (390bp) protein (130aa)

This feature has no annotations

Displaying items 1-30 of 46 in total

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