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L3_072_000M1_scaffold_383

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_383_1
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(193..1053)
DNA (861bp) protein (287aa)
RNA polymerase sigma factor rpoD n=19 Tax=Bacteroidales RepID=A6L8X9_PARD8
RNA polymerase sigma factor rpoD
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:KKB59733.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
L3_072_000M1_scaffold_383_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1197..2768)
DNA (1572bp) protein (524aa)
Peptidase Do n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y850_9PORP
Peptidase Do {ECO:0000313|EMBL:CDD14547.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
serine protease
L3_072_000M1_scaffold_383_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3460..3615)
DNA (156bp) protein (52aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5YW24_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14546.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_072_000M1_scaffold_383_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3640..4998
DNA (1359bp) protein (453aa)
YihY family protein n=2 Tax=Parabacteroides merdae RepID=K5Z860_9PORP
YihY family protein {ECO:0000313|EMBL:EKN07295.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ribonuclease BN
L3_072_000M1_scaffold_383_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5034..6389
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z7G9_9PORP
MATE efflux family protein {ECO:0000313|EMBL:EKN07296.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
MATE efflux family protein
L3_072_000M1_scaffold_383_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6427..6972)
DNA (546bp) protein (182aa)
Nitroreductase family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTA0_9PORP
Nitroreductase family protein {ECO:0000313|EMBL:CDD14543.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
NAD(P)H nitroreductase
L3_072_000M1_scaffold_383_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6969..7571)
DNA (603bp) protein (201aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=4 Tax=Parabacteroides RepID=A7AK85_9PORP
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EKN07298.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_072_000M1_scaffold_383_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7658..7996
DNA (339bp) protein (113aa)
TM2 domain protein n=4 Tax=Parabacteroides RepID=A7AK86_9PORP
TM2 domain protein {ECO:0000313|EMBL:CDD14541.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
TM2 domain-containing protein
L3_072_000M1_scaffold_383_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8447..10093)
DNA (1647bp) protein (549aa)
diphosphate--fructose-6-phosphate 1-phosphotransferase (EC:2.7.1.90)
Diphosphate--fructose-6-phosphate 1-phosphotransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZ35_9PORP
Diphosphate--fructose-6-phosphate 1-phosphotransferase {ECO:0000313|EMBL:CDD14540.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_072_000M1_scaffold_383_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10344..10934)
DNA (591bp) protein (197aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AK88_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14539.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_383_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10936..11958)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AK89_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84411.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_383_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11955..13103)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y842_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14537.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein (DUF262 domain)
L3_072_000M1_scaffold_383_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13222..15591)
DNA (2370bp) protein (790aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6AVH6_9PORP
Putative alpha-1 2-mannosidase {ECO:0000313|EMBL:CDD14536.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_383_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15693..17981)
DNA (2289bp) protein (763aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6AVZ9_9PORP
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EDN84414.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alpha-1,2-mannosidase
L3_072_000M1_scaffold_383_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17999..20326)
DNA (2328bp) protein (776aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K5Z7H6_9PORP
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EDN84415.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase
L3_072_000M1_scaffold_383_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20345..21451)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BI60_9PORP
Plant Basic Secretory Protein {ECO:0000313|EMBL:CDD14533.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
secretory protein
L3_072_000M1_scaffold_383_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22607..24400)
DNA (1794bp) protein (598aa)
SusD family protein n=4 Tax=Parabacteroides RepID=A7AK97_9PORP
SusD family protein {ECO:0000313|EMBL:CDD14532.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_383_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24420..27413)
DNA (2994bp) protein (998aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides merdae RepID=A7AK98_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDN84420.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_383_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27888..31943)
DNA (4056bp) protein (1352aa)
Response regulator receiver domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZ26_9PORP
Response regulator receiver domain protein {ECO:0000313|EMBL:CDD14530.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
two-component system sensor histidine kinase/response regulator
L3_072_000M1_scaffold_383_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32054..33172
DNA (1119bp) protein (373aa)
Antioxidant, AhpC/TSA family n=2 Tax=Parabacteroides merdae RepID=A7AKA2_9PORP
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDN84424.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
thiol:disulfide interchange protein
L3_072_000M1_scaffold_383_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33291..33983
DNA (693bp) protein (231aa)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=A7AKA3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84425.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_383_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33976..34167
DNA (192bp) protein (64aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AKA4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14527.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_383_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34176..35177
DNA (1002bp) protein (334aa)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=A7AKA5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07314.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_072_000M1_scaffold_383_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35217..35450
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XE06_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14526.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_072_000M1_scaffold_383_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35525..35974
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZ23_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14525.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
recombinase
L3_072_000M1_scaffold_383_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35993..36427)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X600_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14524.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_072_000M1_scaffold_383_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36437..38164)
DNA (1728bp) protein (576aa)
Tetratricopeptide repeat protein n=2 Tax=Parabacteroides merdae RepID=A7AKA9_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDN84431.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_383_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38461..40587
DNA (2127bp) protein (709aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
DNA primase n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AKB0_9PORP
DNA primase
L3_072_000M1_scaffold_383_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40593..41519
DNA (927bp) protein (309aa)
ABC transporter, ATP-binding protein n=4 Tax=Parabacteroides RepID=A7AKB1_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN84433.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter ATP-binding protein
L3_072_000M1_scaffold_383_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41516..42835
DNA (1320bp) protein (440aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AKB2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14519.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ABC transporter permease
Displaying items 1-30 of 42 in total

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