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L3_072_000M1_scaffold_393

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_393_1
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1786..2004)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium thermocellum BC1 RepID=U4N0L9_CLOTM
Uncharacterized protein {ECO:0000313|EMBL:EPR13653.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
L3_072_000M1_scaffold_393_2
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4398..5687
DNA (1290bp) protein (430aa)
AAA domain protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G0M4_9PROT
AAA domain protein {ECO:0000313|EMBL:CDE20695.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
Predicted ATPase (AAA+ superfamily)
L3_072_000M1_scaffold_393_3
unknown

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comp(5926..6564)
DNA (639bp) protein (213aa)

This feature has no annotations

L3_072_000M1_scaffold_393_4
unknown

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comp(6629..29992)
DNA (23364bp) protein (7788aa)

This feature has no annotations

L3_072_000M1_scaffold_393_5
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30750..32576)
DNA (1827bp) protein (609aa)
GTP-binding protein TypA n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQK5_9FIRM
typA; GTP-binding protein TypA/BipA homolog
GTP-binding protein TypA/BipA homolog {ECO:0000313|EMBL:CDZ24806.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L3_072_000M1_scaffold_393_6
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(32868..34325)
DNA (1458bp) protein (486aa)
CBS domain protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2FJZ4_9BACT
tlyC; Hemolysin C
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
L3_072_000M1_scaffold_393_7
unknown

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34526..35467
DNA (942bp) protein (314aa)

This feature has no annotations

L3_072_000M1_scaffold_393_8
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35499..37151
DNA (1653bp) protein (551aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5VWJ7_9DELT
L3_072_000M1_scaffold_393_9
Thermoanaerobacter brockii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

37162..38118
DNA (957bp) protein (319aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=509193 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter brockii subsp. finnii (strain ATCC 43586 / DSM 3389; / AKO-1) (Thermoanaerobacter finnii).;"
Thioredoxin reductase n=5 Tax=Thermoanaerobacter RepID=B0K5U9_THEPX
thioredoxin reductase
L3_072_000M1_scaffold_393_10
Clostridium sp. CAG:798, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38106..39110
DNA (1005bp) protein (335aa)
UDP-glucose 4-epimerase n=1 Tax=Clostridium sp. CAG:798 RepID=R6WYI8_9CLOT
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDD16368.1}; TaxID=1262841 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:798.;"
galE; UDP-glucose 4-epimerase
L3_072_000M1_scaffold_393_11
Clostridium sp. CAG:465, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


39132..39749
DNA (618bp) protein (206aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1262811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:465.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Clostridium sp. CAG:465 RepID=R6VEL2_9CLOT
nucleoside-triphosphatase
L3_072_000M1_scaffold_393_12
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

39996..41267
DNA (1272bp) protein (424aa)
putative glycosyl hydrolase id=2295638 bin=GWB2_Clostridiales_37_7 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
putative glycosyl hydrolase
Tax=GWB2_Clostridiales_37_7_curated
L3_072_000M1_scaffold_393_13
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41477..43099
DNA (1623bp) protein (541aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Clostridium sp. CAG:452 RepID=R6Y658_9CLOT
L3_072_000M1_scaffold_393_14
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

43103..43747
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UFD9_9STAP
Uncharacterized protein {ECO:0000313|EMBL:CDC69492.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L3_072_000M1_scaffold_393_15
unknown

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43749..44018
DNA (270bp) protein (90aa)

This feature has no annotations

L3_072_000M1_scaffold_393_16
Parcubacteria bacterium GW2011_GWE2_40_8, Parcubacteria, Bacteria

Not on your lists

44191..45267
DNA (1077bp) protein (359aa)
Acetylornithine deacetylase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DVT2_9FIRM
Acetylornithine deacetylase {ECO:0000313|EMBL:KKR75434.1}; TaxID=1618951 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_40_8.;"
acetylornithine deacetylase
L3_072_000M1_scaffold_393_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45461..46300
DNA (840bp) protein (280aa)
AP endonuclease, family 2 n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQ85_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:EEG95285.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
xylose isomerase domain protein TIM barrel
L3_072_000M1_scaffold_393_18
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46851..47789
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GAG9_9FIRM
Fic/DOC family protein {ECO:0000313|EMBL:EUC77881.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC 35585.;"
Fic/DOC family.
L3_072_000M1_scaffold_393_19
unknown

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47809..48465
DNA (657bp) protein (219aa)

This feature has no annotations

L3_072_000M1_scaffold_393_20
unknown

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48494..49681
DNA (1188bp) protein (396aa)

This feature has no annotations

L3_072_000M1_scaffold_393_21
unknown

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49865..50077
DNA (213bp) protein (71aa)

This feature has no annotations

L3_072_000M1_scaffold_393_22
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50071..50337
DNA (267bp) protein (89aa)
Uncharacterized conserved protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WPC6_9CLOT
Uncharacterized conserved protein {ECO:0000313|EMBL:CDD08749.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
hypothetical protein
L3_072_000M1_scaffold_393_23
Clostridium sp. CAG:798, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50356..53079
DNA (2724bp) protein (908aa)
Helicase n=1 Tax=Clostridium sp. CAG:798 RepID=R6XMI8_9CLOT
Helicase {ECO:0000313|EMBL:CDD17456.1}; TaxID=1262841 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:798.;"
DNA helicase
L3_072_000M1_scaffold_393_24
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52969..53472)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A9V8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37872.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L3_072_000M1_scaffold_393_25
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53691..55880)
DNA (2190bp) protein (730aa)
DNA or RNA helicases of superfamily II n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FI86_9FIRM
DNA or RNA helicases of superfamily II {ECO:0000313|EMBL:CCY04755.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
DNA or RNA helicases of superfamily II
L3_072_000M1_scaffold_393_26
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55883..57514)
DNA (1632bp) protein (544aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FX20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY04756.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
L3_072_000M1_scaffold_393_27
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

57825..58763
DNA (939bp) protein (313aa)
Site-specific recombinase phage integrase family n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FVN0_9FIRM
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CCY04747.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
putative site-specific recombinase
L3_072_000M1_scaffold_393_28
unknown

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58866..59675
DNA (810bp) protein (270aa)

This feature has no annotations

L3_072_000M1_scaffold_393_29
Spiroplasma syrphidicola, Spiroplasma, Entomoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

60062..61288
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Spiroplasma syrphidicola EA-1 RepID=R4UDV6_9MOLU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGM26079.1}; TaxID=1276229 species="Bacteria; Tenericutes; Mollicutes; Entomoplasmatales; Spiroplasmataceae; Spiroplasma.;" source="Spiroplasma syrphidicola EA-1.;"
L3_072_000M1_scaffold_393_30
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61487..61747
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K2V8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE70635.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
Displaying items 1-30 of 37 in total

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