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L3_072_000M1_scaffold_404

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_404_1
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16..1071
DNA (1056bp) protein (352aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W1Z5_9FIRM
L3_072_000M1_scaffold_404_2
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1163..1588
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WH08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03446.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
engC2; GTPase EngC2
L3_072_000M1_scaffold_404_3
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1739..3289
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WH15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03451.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_404_4
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3319..4305
DNA (987bp) protein (329aa)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6XAV4_9FIRM
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:CDD03452.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
ATPase AAA
L3_072_000M1_scaffold_404_5
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4305..5528
DNA (1224bp) protein (408aa)
Uncharacterized conserved protein (Some members contain a von Willebrand factor type A (VWA) domain) n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VXG2_9FIRM
Uncharacterized conserved protein (Some members contain a von Willebrand factor type A (VWA) domain) {ECO:0000313|EMBL:CDD03453.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_404_6
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5525..7792
DNA (2268bp) protein (756aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6XAV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03457.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_072_000M1_scaffold_404_7
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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7938..10901
DNA (2964bp) protein (988aa)
Ig domain protein group 2 domain protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HAQ5_9FIRM
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:CDB30641.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_072_000M1_scaffold_404_8
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11178..12557)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W224_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03470.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_072_000M1_scaffold_404_9
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12615..12818)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6XAX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03472.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_404_10
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12873..14045)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W9G6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03474.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
Uncharacterized flavoproteins
L3_072_000M1_scaffold_404_11
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14210..15001
DNA (792bp) protein (264aa)
NGG1-interacting factor 3 n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W229_9FIRM
NGG1-interacting factor 3 {ECO:0000313|EMBL:CDD03475.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_072_000M1_scaffold_404_12
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15085..16440)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6XAY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03477.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_404_13
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16621..17895
DNA (1275bp) protein (425aa)
Amino acid carrier protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VXJ1_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:CDD03483.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
amino acid carrier protein
L3_072_000M1_scaffold_404_14
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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17877..20360
DNA (2484bp) protein (828aa)
Calcium-translocating P-type ATPase, PMCA-type id=3958292 bin=GWF2_Clostridiales_38_85 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
calcium-translocating P-type ATPase, PMCA-type
Tax=GWF2_Clostridiales_38_85_curated
L3_072_000M1_scaffold_404_15
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20350..21027)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W283_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03500.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_072_000M1_scaffold_404_16
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21242..22231
DNA (990bp) protein (330aa)
Lipolytic protein G-D-S-L family n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WH85_9FIRM
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:CDD03501.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
Carbohydrate Esterase Family 2 protein
L3_072_000M1_scaffold_404_17
unknown

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22239..22571
DNA (333bp) protein (111aa)

This feature has no annotations

L3_072_000M1_scaffold_404_18
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22646..23917)
DNA (1272bp) protein (424aa)
Inactivated predicted Zn-dependent protease PMBA ortholog n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W296_9FIRM
Inactivated predicted Zn-dependent protease PMBA ortholog {ECO:0000313|EMBL:CDD03505.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
putative Zn-dependent protease-like protein
L3_072_000M1_scaffold_404_19
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23914..25353)
DNA (1440bp) protein (480aa)
Predicted Zn-dependent proteases TLDD ortholog n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WH89_9FIRM
Predicted Zn-dependent proteases TLDD ortholog {ECO:0000313|EMBL:CDD03506.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
Zn-dependent protease
L3_072_000M1_scaffold_404_20
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25350..25811)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6XB41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03507.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_404_21
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25968..27383
DNA (1416bp) protein (472aa)
gdhA; NADP-specific glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VXP3_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_404_22
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27507..27674
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W2A0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03510.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_404_23
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27652..28836
DNA (1185bp) protein (395aa)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WH93_9FIRM
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CDD03511.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_072_000M1_scaffold_404_24
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28841..29554
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6XB46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03512.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
HAD-superfamily hydrolase
L3_072_000M1_scaffold_404_25
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29664..35108)
DNA (5445bp) protein (1815aa)
thermophilic serine proteinase (EC:3.4.21.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VXP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03513.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_404_26
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35101..35859)
DNA (759bp) protein (253aa)
Putative N-6 adenine-specific DNA methylase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W727_9FIRM
Putative N-6 adenine-specific DNA methylase {ECO:0000313|EMBL:CDD02514.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
type 11 methyltransferase
L3_072_000M1_scaffold_404_27
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35950..36126)
DNA (177bp) protein (59aa)
Ferredoxin n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W4T1_9FIRM
Ferredoxin {ECO:0000313|EMBL:CDD04490.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
Ferredoxin
L3_072_000M1_scaffold_404_28
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36178..37443)
DNA (1266bp) protein (422aa)
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49)
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WK46_9FIRM
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:CDD04491.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_404_29
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37460..38431)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W0B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD04493.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_404_30
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38677..40206
DNA (1530bp) protein (510aa)
Extracellular solute-binding protein family 1 n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W4T8_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDD04495.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
Displaying items 1-30 of 39 in total

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