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L3_072_000M1_scaffold_413

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_413_1
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

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339..647
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6YV63_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rpsJ; 30S ribosomal protein S10
L3_072_000M1_scaffold_413_2
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

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669..1328
DNA (660bp) protein (220aa)
50S ribosomal protein L3 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XF06_9FIRM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rplC; 50S ribosomal protein L3
L3_072_000M1_scaffold_413_3
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

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1343..1969
DNA (627bp) protein (209aa)
50S ribosomal protein L4 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XT38_9FIRM
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rplD; ribosomal protein L4
L3_072_000M1_scaffold_413_4
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

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1969..2253
DNA (285bp) protein (95aa)
50S ribosomal protein L23 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XKU3_9FIRM
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rplW; 50S ribosomal protein L23
L3_072_000M1_scaffold_413_5
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

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2270..3103
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6Y0T7_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rplB; 50S ribosomal protein L2
L3_072_000M1_scaffold_413_6
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

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3119..3397
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6YV67_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rpsS; 30S ribosomal protein S19
L3_072_000M1_scaffold_413_7
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


3409..3747
DNA (339bp) protein (113aa)
50S ribosomal protein L22 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XF11_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rplV; 50S ribosomal protein L22
L3_072_000M1_scaffold_413_8
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


3761..4432
DNA (672bp) protein (224aa)
30S ribosomal protein S3 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XT43_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rpsC; 30S ribosomal protein S3
L3_072_000M1_scaffold_413_9
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


4435..4854
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XKU8_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rplP; 50S ribosomal protein L16
L3_072_000M1_scaffold_413_10
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


4854..5105
DNA (252bp) protein (84aa)
50S ribosomal protein L29 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6Y0U2_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rpmC; 50S ribosomal protein L29
L3_072_000M1_scaffold_413_11
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


5119..5379
DNA (261bp) protein (87aa)
30S ribosomal protein S17 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6YV71_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
30S ribosomal protein S17
L3_072_000M1_scaffold_413_12
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


5393..5761
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XF17_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rplN; 50S ribosomal protein L14
L3_072_000M1_scaffold_413_13
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


5777..6100
DNA (324bp) protein (108aa)
50S ribosomal protein L24 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XT48_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rplX; 50S ribosomal protein L24
L3_072_000M1_scaffold_413_14
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


6123..6665
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XKV1_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rplE; 50S ribosomal protein L5
L3_072_000M1_scaffold_413_15
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


6676..6861
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6Y0U7_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rpsN; 30S ribosomal protein S14
L3_072_000M1_scaffold_413_16
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


6880..7275
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6YV75_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rpsH; 30S ribosomal protein S8
L3_072_000M1_scaffold_413_17
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


7285..7821
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XF23_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
LSU ribosomal protein L6P
L3_072_000M1_scaffold_413_18
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


7841..8203
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XT53_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rplR; putative 50S ribosomal protein L18
L3_072_000M1_scaffold_413_19
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


8215..8733
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XKV5_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
30S ribosomal protein S5
L3_072_000M1_scaffold_413_20
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


8748..8930
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6Y0V3_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rpmD; 50S ribosomal protein L30
L3_072_000M1_scaffold_413_21
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


8942..9385
DNA (444bp) protein (148aa)
50S ribosomal protein L15 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6YV80_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rplO; 50S ribosomal protein L15
L3_072_000M1_scaffold_413_22
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

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9387..10730
DNA (1344bp) protein (448aa)
Protein translocase subunit SecY n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XF28_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
secY; Protein translocase subunit SecY
L3_072_000M1_scaffold_413_23
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

10750..11400
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XT56_9FIRM
L3_072_000M1_scaffold_413_24
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

11394..12155
DNA (762bp) protein (254aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
Methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XKV9_9FIRM
L3_072_000M1_scaffold_413_25
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

12155..12376
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6Y0V6_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
infA; translation initiation factor IF-1
L3_072_000M1_scaffold_413_26
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

12414..12530
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=2 Tax=Firmicutes RepID=R6ULH8_9STAP
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rpmJ; 50S ribosomal protein L36
L3_072_000M1_scaffold_413_27
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


12548..12913
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XF32_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rpsM; 30S ribosomal protein S13
L3_072_000M1_scaffold_413_28
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


12928..13314
DNA (387bp) protein (129aa)
30S ribosomal protein S11 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XT60_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rpsK; 30S ribosomal protein S11
L3_072_000M1_scaffold_413_29
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

13375..14505
DNA (1131bp) protein (377aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XKW3_9FIRM
L3_072_000M1_scaffold_413_30
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists


14543..14908
DNA (366bp) protein (122aa)
50S ribosomal protein L17 n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6Y0W1_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rplQ; 50S ribosomal protein L17
Displaying items 1-30 of 54 in total

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