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L3_072_000M1_scaffold_418

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_418_1
Firmicutes bacterium CAG:582, Firmicutes, Bacteria

Not on your lists

comp(76..216)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:582 RepID=R6GU16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB28933.1}; TaxID=1262997 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:582.;"
ABC transporter-like protein
L3_072_000M1_scaffold_418_2
unknown

Not on your lists

comp(386..1447)
DNA (1062bp) protein (354aa)

This feature has no annotations

L3_072_000M1_scaffold_418_3
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1749..2345)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B5CFB1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL36454.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L3_072_000M1_scaffold_418_4
Clostridium sp. CAG:465, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2368..3378)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:465 RepID=R6TZ62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC78753.1}; TaxID=1262811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:465.;"
toxin Fic
L3_072_000M1_scaffold_418_5
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3385..4572)
DNA (1188bp) protein (396aa)
Putative RNA methyltransferase n=1 Tax=Clostridium sp. CAG:914 RepID=R7M4A9_9CLOT
Putative RNA methyltransferase {ECO:0000313|EMBL:CDE95211.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
putative RNA methyltransferase
L3_072_000M1_scaffold_418_6
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4572..6776)
DNA (2205bp) protein (735aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
Primosomal protein N' (Replication factor Y)-superfamily II helicase n=1 Tax=Clostridium sp. CAG:914 RepID=R7M657_9CLOT
priA; Primosome assembly protein
L3_072_000M1_scaffold_418_7
unknown

Not on your lists

comp(6879..7385)
DNA (507bp) protein (169aa)

This feature has no annotations

L3_072_000M1_scaffold_418_8
Firmicutes bacterium CAG:582, Firmicutes, Bacteria

Not on your lists

comp(7493..7894)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:582 RepID=R6HQR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB28227.1}; TaxID=1262997 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:582.;"
heat shock protein Hsp20
L3_072_000M1_scaffold_418_9
Firmicutes bacterium CAG:321, Firmicutes, Bacteria

Not on your lists

8061..10184
DNA (2124bp) protein (708aa)
ATP-dependent chaperone protein ClpB n=1 Tax=Firmicutes bacterium CAG:321 RepID=R7HHE9_9FIRM
ATP-dependent chaperone protein ClpB {ECO:0000313|EMBL:CDE38800.1}; TaxID=1263018 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:321.;"
hypothetical protein
L3_072_000M1_scaffold_418_10
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10244..11050)
DNA (807bp) protein (269aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JRK7_CELLD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADZ83928.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_072_000M1_scaffold_418_11
unknown

Not on your lists

comp(11114..11842)
DNA (729bp) protein (243aa)

This feature has no annotations

L3_072_000M1_scaffold_418_12
Clostridium sp. CAG:524, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12031..12825)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:524 RepID=R6B811_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA60363.1}; TaxID=1262817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:524.;"
hypothetical protein
L3_072_000M1_scaffold_418_13
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13534..14607)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:914 RepID=R7M609_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE96105.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
L3_072_000M1_scaffold_418_14
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14659..15111)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:914 RepID=R7M4V6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE96104.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
nlpD; M23 family metalloendopeptidase
L3_072_000M1_scaffold_418_15
Coprobacillus sp. CAG:605, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15156..15602)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:605 RepID=R5VM44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ88909.1}; TaxID=1262855 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:605.;"
L3_072_000M1_scaffold_418_16
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15604..16080)
DNA (477bp) protein (159aa)
CoaC n=1 Tax=Clostridium sp. CAG:914 RepID=R7M8L0_9CLOT
CoaC {ECO:0000313|EMBL:CDE96102.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
L3_072_000M1_scaffold_418_17
Clostridium sp. CAG:302, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16129..16869)
DNA (741bp) protein (247aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:302.;"
truA1; tRNA pseudouridine synthase A 1 (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Clostridium sp. CAG:302 RepID=R6MZR5_9CLOT
L3_072_000M1_scaffold_418_18
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16974..19433)
DNA (2460bp) protein (820aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:914 RepID=R7M2I5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE95244.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
yfhO; Bacterial membrane protein, YfhO family
L3_072_000M1_scaffold_418_19
unknown

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comp(19519..20661)
DNA (1143bp) protein (381aa)

This feature has no annotations

L3_072_000M1_scaffold_418_20
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20684..21127)
DNA (444bp) protein (148aa)
DivIVA domain containing protein n=1 Tax=Clostridium sp. CAG:914 RepID=R7M6B0_9CLOT
DivIVA domain containing protein {ECO:0000313|EMBL:CDE95242.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
divIVA; cell division protein DivIVA
L3_072_000M1_scaffold_418_21
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21140..21520)
DNA (381bp) protein (127aa)
Cell division protein SepF n=1 Tax=Clostridium sp. CAG:914 RepID=R7M4G6_9CLOT
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
hypothetical protein
L3_072_000M1_scaffold_418_22
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21667..22302)
DNA (636bp) protein (212aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Clostridium sp. CAG:914 RepID=R7M661_9CLOT
L3_072_000M1_scaffold_418_23
unknown

Not on your lists

22394..22612
DNA (219bp) protein (73aa)

This feature has no annotations

L3_072_000M1_scaffold_418_24
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22668..23141
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:914 RepID=R7M7K3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE95883.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
cotJB; CotJB
L3_072_000M1_scaffold_418_25
Firmicutes bacterium CAG:321, Firmicutes, Bacteria

Not on your lists

23141..23701
DNA (561bp) protein (187aa)
CotJC protein n=1 Tax=Firmicutes bacterium CAG:321 RepID=R7HH45_9FIRM
CotJC protein {ECO:0000313|EMBL:CDE38959.1}; TaxID=1263018 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:321.;"
cotJC; Protein CotJC
L3_072_000M1_scaffold_418_26
unknown

Not on your lists

comp(23748..24686)
DNA (939bp) protein (313aa)

This feature has no annotations

L3_072_000M1_scaffold_418_27
unknown

Not on your lists

comp(24699..24929)
DNA (231bp) protein (77aa)

This feature has no annotations

L3_072_000M1_scaffold_418_28
Clostridium sp. CAG:302, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25112..27319)
DNA (2208bp) protein (736aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1262793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:302.;"
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Clostridium sp. CAG:302 RepID=R6M630_9CLOT
L3_072_000M1_scaffold_418_29
unknown

Not on your lists

comp(27300..27431)
DNA (132bp) protein (44aa)

This feature has no annotations

L3_072_000M1_scaffold_418_30
Clostridium sp. CAG:302, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27382..27651)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Clostridium sp. CAG:302 RepID=R6LVB2_9CLOT
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1262793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:302.;"
rpsO; 30S ribosomal protein S15
Displaying items 1-30 of 55 in total

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