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L3_072_000M1_scaffold_450

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_450_1
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..1084)
DNA (1083bp) protein (361aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Phosphomethylpyrimidine synthase n=1 Tax=Prevotella copri CAG:164 RepID=R6BR83_9BACT
phosphomethylpyrimidine synthase
L3_072_000M1_scaffold_450_2
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(1194..1973)
DNA (780bp) protein (260aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
Thiazole synthase n=1 Tax=Prevotella sp. CAG:604 RepID=R6AY17_9BACT
thiG; thiazole biosynthesis protein ThiG
L3_072_000M1_scaffold_450_3
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(2004..2654)
DNA (651bp) protein (217aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
thiE; thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Prevotella sp. CAG:604 RepID=R6B742_9BACT
L3_072_000M1_scaffold_450_4
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(2687..2884)
DNA (198bp) protein (66aa)
Thiamine biosynthesis protein ThiS n=2 Tax=Prevotella RepID=D1PFK8_9BACT
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:CRH72802.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
thiS; thiamine biosynthesis protein ThiS
L3_072_000M1_scaffold_450_5
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3368..4246
DNA (879bp) protein (293aa)
peptidase, M48 family (EC:3.4.24.-)
Putative lipoprotein n=1 Tax=Prevotella copri CAG:164 RepID=R6BZP4_9BACT
Putative lipoprotein {ECO:0000313|EMBL:CDA66484.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L3_072_000M1_scaffold_450_6
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4269..4721
DNA (453bp) protein (151aa)
Putative integral membrane protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BTD2_9BACT
Putative integral membrane protein {ECO:0000313|EMBL:CDA66485.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
nodulation efficiency protein NfeD
L3_072_000M1_scaffold_450_7
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4792..5742
DNA (951bp) protein (317aa)
Band 7/Mec-2 family protein n=2 Tax=root RepID=R6C4U5_9BACT
Band 7/Mec-2 family protein {ECO:0000313|EMBL:CDA66486.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_072_000M1_scaffold_450_8
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5773..6885
DNA (1113bp) protein (371aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Prevotella copri CAG:164 RepID=R6CMK3_9BACT
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CDA66487.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
UDP-N-acetylglucosamine 2-epimerase
L3_072_000M1_scaffold_450_9
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6983..7903)
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=root RepID=R6BQV8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA66488.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_072_000M1_scaffold_450_10
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8124..8900
DNA (777bp) protein (259aa)
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type n=1 Tax=Prevotella copri DSM 18205 RepID=D1P9N7_9BACT
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type {ECO:0000313|EMBL:EFB36550.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
cyclophilin type peptidyl-prolyl cis-trans isomerase
L3_072_000M1_scaffold_450_11
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8934..10151
DNA (1218bp) protein (406aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase n=1 Tax=Prevotella copri CAG:164 RepID=R6BTD9_9BACT
L-serine dehydratase {ECO:0000313|EMBL:CDA66490.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L3_072_000M1_scaffold_450_12
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10234..11187
DNA (954bp) protein (318aa)
Signal recognition particle receptor FtsY n=1 Tax=Prevotella sp. CAG:604 RepID=R6BC71_9BACT
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1262932 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
ftsY; recognition particle-docking protein FtsY
L3_072_000M1_scaffold_450_13
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11202..12503
DNA (1302bp) protein (434aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
rimO; ribosomal protein S12 methylthiotransferase RimO (EC:2.1.1.- 2.8.1.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Prevotella copri CAG:164 RepID=R6BQR7_9BACT
L3_072_000M1_scaffold_450_14
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12514..12804
DNA (291bp) protein (97aa)
DNA-binding protein HU n=2 Tax=Prevotella RepID=D1P986_9BACT
SPBc2 prophage-derived DNA-binding protein HU 2 {ECO:0000313|EMBL:CDA66454.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
HU family DNA-binding protein
L3_072_000M1_scaffold_450_15
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12801..14237
DNA (1437bp) protein (479aa)
DNA-binding protein HU n=1 Tax=Prevotella copri DSM 18205 RepID=D1P985_9BACT
DNA-binding protein HU {ECO:0000313|EMBL:EFB36696.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L3_072_000M1_scaffold_450_16
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14406..16370)
DNA (1965bp) protein (655aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
ligA; DNA ligase (NAD+) (EC:6.5.1.2)
DNA ligase n=1 Tax=Prevotella copri DSM 18205 RepID=D1P9P6_9BACT
L3_072_000M1_scaffold_450_17
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16391..16912)
DNA (522bp) protein (174aa)
Acetyltransferase, GNAT family n=2 Tax=Prevotella RepID=D1P9P5_9BACT
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDA66481.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Acetyltransferase (GNAT) family protein
L3_072_000M1_scaffold_450_18
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17113..18393)
DNA (1281bp) protein (427aa)
Cobalamin synthesis protein/P47K family protein n=1 Tax=Prevotella copri CAG:164 RepID=R6CMJ7_9BACT
Cobalamin synthesis protein/P47K family protein {ECO:0000313|EMBL:CDA66482.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
CobW/P47K family protein
L3_072_000M1_scaffold_450_19
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18460..20532)
DNA (2073bp) protein (691aa)
Cytochrome C biogenesis protein transmembrane region n=2 Tax=root RepID=D1P9K9_9BACT
Cytochrome C biogenesis protein transmembrane region {ECO:0000313|EMBL:EFB36514.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
thiol:disulfide interchange protein
L3_072_000M1_scaffold_450_20
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20706..21128
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C2U6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA65771.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L3_072_000M1_scaffold_450_21
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21284..22492
DNA (1209bp) protein (403aa)
Secretion protein HlyD n=1 Tax=Prevotella copri CAG:164 RepID=R6CKE4_9BACT
Secretion protein HlyD {ECO:0000313|EMBL:CDA65772.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
RND family efflux transporter MFP subunit
L3_072_000M1_scaffold_450_22
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22545..25733
DNA (3189bp) protein (1063aa)
Cation efflux system protein CzcA n=1 Tax=Prevotella copri CAG:164 RepID=R6BNQ5_9BACT
Cation efflux system protein CzcA {ECO:0000313|EMBL:CDA65773.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
CzcA family heavy metal efflux pump
L3_072_000M1_scaffold_450_23
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25740..27014
DNA (1275bp) protein (425aa)
Putative outer membrane efflux protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BXL1_9BACT
Putative outer membrane efflux protein {ECO:0000313|EMBL:CDA65774.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
CzcA family heavy metal efflux pump
L3_072_000M1_scaffold_450_24
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27110..29821)
DNA (2712bp) protein (904aa)
ATPase family associated with various cellular activities (AAA) n=2 Tax=root RepID=D1PA52_9BACT
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EFB36381.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
putative negative regulator of genetic competence ClpC/MecB
L3_072_000M1_scaffold_450_25
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


30094..32706
DNA (2613bp) protein (871aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Prevotella copri DSM 18205 RepID=D1PA51_9BACT
L3_072_000M1_scaffold_450_26
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32784..33992
DNA (1209bp) protein (403aa)
Putative TPR domain protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C0W0_9BACT
Putative TPR domain protein {ECO:0000313|EMBL:CDA66874.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_072_000M1_scaffold_450_27
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34343..35914
DNA (1572bp) protein (524aa)
Putative lipoprotein n=1 Tax=Prevotella copri CAG:164 RepID=R6CMT2_9BACT
Putative lipoprotein {ECO:0000313|EMBL:CDA66557.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_072_000M1_scaffold_450_28
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35954..36406
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGG1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB34216.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L3_072_000M1_scaffold_450_29
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36420..37046)
DNA (627bp) protein (209aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Prevotella sp. CAG:604 RepID=R6AZ43_9BACT
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:CDA57123.1}; TaxID=1262932 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
glycosyl transferase possibly involved in lipopolysaccharide synthesis
L3_072_000M1_scaffold_450_30
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37043..38143)
DNA (1101bp) protein (367aa)
Glycosyltransferase, group 4 family {ECO:0000313|EMBL:EFB36394.1}; EC=2.7.8.- {ECO:0000313|EMBL:EFB36394.1};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Glycosyltransferase, group 4 family n=1 Tax=Prevotella copri DSM 18205 RepID=D1PA65_9BACT
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
Displaying items 1-30 of 40 in total

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