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L3_072_000M1_scaffold_458

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_458_1
unknown

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2..652
DNA (651bp) protein (217aa)

This feature has no annotations

L3_072_000M1_scaffold_458_2
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(831..1148)
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJ94_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63006.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_458_3
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1287..1976)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0003088AF0
Uncharacterized protein {ECO:0000313|EMBL:EFR58970.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_072_000M1_scaffold_458_4
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1973..2170)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002E0F7AE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ76183.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_072_000M1_scaffold_458_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2411..2779)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJF3_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77121.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_458_6
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2757..3092)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKI7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63449.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_458_7
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3288..4508)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI000305BCE9
Site-specific recombinase XerD {ECO:0000313|EMBL:CDE65444.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
site-specific recombinase XerD
L3_072_000M1_scaffold_458_8
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5252..7147)
DNA (1896bp) protein (632aa)
Long-chain acyl-CoA synthetases (AMP-forming) {ECO:0000313|EMBL:CBK63189.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CBK63189.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Long-chain acyl-CoA synthetases (AMP-forming) (EC:6.2.1.3)
long-chain fatty acid--CoA ligase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DCA85D
L3_072_000M1_scaffold_458_9
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7199..8989)
DNA (1791bp) protein (597aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
GTP-binding protein LepA n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000315D21E
GTP-binding protein LepA
L3_072_000M1_scaffold_458_10
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9250..10110
DNA (861bp) protein (287aa)
Putative 4-hydroxybenzoate polyprenyltransferase {ECO:0000313|EMBL:EDS02495.1}; EC=2.5.1.- {ECO:0000313|EMBL:EDS02495.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
4-hydroxybenzoate polyprenyltransferase (EC:2.5.1.39)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003792EDE
L3_072_000M1_scaffold_458_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10133..11293
DNA (1161bp) protein (387aa)
Diaminopimelate decarboxylase {ECO:0000256|RuleBase:RU003738}; EC=4.1.1.20 {ECO:0000256|RuleBase:RU003738};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
diaminopimelate decarboxylase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003711BBA
diaminopimelate decarboxylase
L3_072_000M1_scaffold_458_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11301..12200
DNA (900bp) protein (300aa)
permease n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F99DED
EamA-like transporter family {ECO:0000313|EMBL:CDD25268.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
EamA-like transporter family.
L3_072_000M1_scaffold_458_13
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12223..13134)
DNA (912bp) protein (304aa)
multidrug transporter n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000304DDD7
DMT(drug/metabolite transporter) superfamily permease
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:AFL77479.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_458_14
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13235..13972)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000308CF41
MIP family channel protein {ECO:0000313|EMBL:EKN05832.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
major intrinsic protein
L3_072_000M1_scaffold_458_15
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13998..15494)
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
glpK; Glycerol kinase (EC:2.7.1.30)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000304972F
L3_072_000M1_scaffold_458_16
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15502..16155)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000307D1BE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63371.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_458_17
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16322..18790
DNA (2469bp) protein (823aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
phenylalanyl-tRNA synthetase subunit beta n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037FC43D
L3_072_000M1_scaffold_458_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18887..19669)
DNA (783bp) protein (261aa)
nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003146A1E
Protein MazG {ECO:0000313|EMBL:CDD25262.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
MazG family protein
L3_072_000M1_scaffold_458_19
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19726..20592)
DNA (867bp) protein (289aa)
AraC family transcriptional regulator n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E3145B
Uncharacterized protein {ECO:0000313|EMBL:CDB82106.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
AraC family transcriptional regulator
L3_072_000M1_scaffold_458_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20721..21347
DNA (627bp) protein (209aa)
nitroreductase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00035CC31B
Uncharacterized protein {ECO:0000313|EMBL:EIY19994.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
nitroreductase family protein
L3_072_000M1_scaffold_458_21
Bacteroides sp. CAG:633, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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21483..21965
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031F4E25
Uncharacterized protein {ECO:0000313|EMBL:CDB11273.1}; TaxID=1262744 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:633.;"
5-nitroimidazole antibiotic resistance protein
L3_072_000M1_scaffold_458_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21977..24142
DNA (2166bp) protein (722aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000363EFE7
Glycosyl hydrolase family 20 catalytic domain protein {ECO:0000313|EMBL:CDD25263.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
N-acetyl-beta-hexosaminidase
L3_072_000M1_scaffold_458_23
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24405..24827
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003116469
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63181.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_458_24
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24944..25804)
DNA (861bp) protein (287aa)
RNA polymerase sigma factor rpoD n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DFA2A2
Sigma-70 region 2 {ECO:0000313|EMBL:EDS03248.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
RNA polymerase sigma factor, sigma-70 family
L3_072_000M1_scaffold_458_25
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26036..27526)
DNA (1491bp) protein (497aa)
serine protease MucD n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002ED79CD
Periplasmic serine protease Do/DeqQ family {ECO:0000313|EMBL:CDC97046.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
periplasmic serine protease, Do/DeqQ family
L3_072_000M1_scaffold_458_26
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27801..28016)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F86CC4
Uncharacterized protein {ECO:0000313|EMBL:CCZ75304.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L3_072_000M1_scaffold_458_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28180..29484)
DNA (1305bp) protein (435aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthetase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003786246
L3_072_000M1_scaffold_458_28
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30082..30615
DNA (534bp) protein (178aa)
acetyltransferase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003122573
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:CDE63533.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
carbonic anhydrase/acetyltransferase
L3_072_000M1_scaffold_458_29
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30630..32006
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FFAB48
Putative regulator of cell autolysis
Putative regulator of cell autolysis {ECO:0000313|EMBL:CBK63183.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_458_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32003..32770
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002EFC577
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CDD25259.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Response regulator of the LytR/AlgR family
Displaying items 1-30 of 41 in total

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