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L3_072_000M1_scaffold_459

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_459_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..2385
DNA (2385bp) protein (795aa)
Uncharacterized protein n=2 Tax=root RepID=A5ZF54_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21570.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000M1_scaffold_459_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2640..4175)
DNA (1536bp) protein (512aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I8UXG8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17717.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Arylsulfatase A and related enzymes
L3_072_000M1_scaffold_459_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4570..8652)
DNA (4083bp) protein (1361aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PMK3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17716.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
two-component system sensor histidine kinase/response regulator
L3_072_000M1_scaffold_459_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8763..9404
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZF57_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21573.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000M1_scaffold_459_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9516..10286)
DNA (771bp) protein (257aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase n=2 Tax=Bacteroides caccae RepID=A5ZF58_9BACE
UDP-N-acetylglucosamine acyltransferase
L3_072_000M1_scaffold_459_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10305..11696)
DNA (1392bp) protein (464aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=2 Tax=Bacteroides caccae RepID=A5ZF59_9BACE
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EDM21575.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
L3_072_000M1_scaffold_459_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11708..15136)
DNA (3429bp) protein (1143aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=2 Tax=Bacteroides RepID=I8UU44_9BACE
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:CCZ73397.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Cation/multidrug efflux pump
L3_072_000M1_scaffold_459_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15152..16327)
DNA (1176bp) protein (392aa)
Efflux transporter, RND family, MFP subunit n=3 Tax=Bacteroides RepID=A5ZF61_9BACE
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CCZ73396.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RND family efflux transporter, MFP subunit
L3_072_000M1_scaffold_459_9
unknown

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16355..16525
DNA (171bp) protein (57aa)

This feature has no annotations

L3_072_000M1_scaffold_459_10
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16510..19617)
DNA (3108bp) protein (1036aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta galactosidase small chain n=3 Tax=Bacteroides RepID=A5ZF62_9BACE
L3_072_000M1_scaffold_459_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19730..19963
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZF63_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73394.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_072_000M1_scaffold_459_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20056..23232
DNA (3177bp) protein (1059aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U5P2_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CCZ73393.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000M1_scaffold_459_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23244..25040
DNA (1797bp) protein (599aa)
SusD family protein n=2 Tax=Bacteroides caccae RepID=A5ZF65_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17700.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000M1_scaffold_459_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25074..27839
DNA (2766bp) protein (922aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UQG1_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CCZ73391.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
TonB-dependent receptor
L3_072_000M1_scaffold_459_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27854..29503
DNA (1650bp) protein (550aa)
SusD family protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZF68_9BACE
SusD family protein {ECO:0000313|EMBL:EDM21584.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000M1_scaffold_459_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29795..31744
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UXE6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17697.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000M1_scaffold_459_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31692..32564
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZF70_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21586.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Protein of unknown function (DUF3108).
L3_072_000M1_scaffold_459_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32627..33037)
DNA (411bp) protein (137aa)
Phenylacetic acid degradation protein PaaD n=3 Tax=Bacteroides RepID=I8UU35_9BACE
Phenylacetic acid degradation protein PaaD {ECO:0000313|EMBL:EIY17695.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
phenylacetic acid degradation protein
L3_072_000M1_scaffold_459_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33177..34379
DNA (1203bp) protein (401aa)
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:EDM21588.1}; EC=3.2.1.- {ECO:0000313|EMBL:EDM21588.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Glycosyl hydrolase, family 88 n=3 Tax=Bacteroides RepID=A5ZF72_9BACE
unsaturated glucuronyl hydrolase
L3_072_000M1_scaffold_459_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34424..35971
DNA (1548bp) protein (516aa)
Arylsulfatase {ECO:0000313|EMBL:EDM21589.1}; EC=3.1.6.- {ECO:0000313|EMBL:EDM21589.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Arylsulfatase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZF73_9BACE
Arylsulfatase A and related enzymes
L3_072_000M1_scaffold_459_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36012..38879
DNA (2868bp) protein (956aa)
Chondroitin sulfate ABC lyase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZF74_9BACE
Chondroitin sulfate ABC lyase {ECO:0000256|PIRNR:PIRNR034515}; Chondroitin ABC eliminase {ECO:0000256|PIRNR:PIRNR034515}; Chondroitin ABC lyase {ECO:0000256|PIRNR:PIRNR034515}; Chondroitinase ABC {ECO:0000256|PIRNR:PIRNR034515}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Polysaccharide lyase family 8, C-terminal beta-sandwich domain./Lyase, catalytic./Polysaccharide lyase family 8, super-sandwich domain./Lyase, N terminal.
L3_072_000M1_scaffold_459_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39008..40489)
DNA (1482bp) protein (494aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=2 Tax=Bacteroides caccae RepID=A5ZF75_9BACE
L3_072_000M1_scaffold_459_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41297..42112)
DNA (816bp) protein (272aa)
Cof-like hydrolase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UQF2_9BACE
Cof-like hydrolase {ECO:0000313|EMBL:CCZ73381.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
HAD-superfamily hydrolase, subfamily IIB
L3_072_000M1_scaffold_459_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42081..42170)
DNA (90bp) protein (30aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9ECK9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73380.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_072_000M1_scaffold_459_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42186..45032)
DNA (2847bp) protein (949aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PMZ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17688.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Superfamily II DNA/RNA helicases, SNF2 family
L3_072_000M1_scaffold_459_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45085..46182
DNA (1098bp) protein (366aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZF78_9BACE
L3_072_000M1_scaffold_459_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46322..47842)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I9PMH1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17686.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
auxin-regulated protein
L3_072_000M1_scaffold_459_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48006..49016
DNA (1011bp) protein (337aa)
pfkA; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UU22_9BACE
6-phosphofructokinase 3 {ECO:0000313|EMBL:EIY17685.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_000M1_scaffold_459_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48958..49947)
DNA (990bp) protein (330aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ECK4_9BACE
L3_072_000M1_scaffold_459_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49913..51175)
DNA (1263bp) protein (421aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.179 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=2 Tax=Bacteroides caccae RepID=A5ZF83_9BACE
Displaying 30 items

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