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L3_072_000M1_scaffold_468

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_468_1
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..2933
DNA (2931bp) protein (977aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X7X9_9PORP
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EJZ63804.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
aminoglycoside transporter
L3_072_000M1_scaffold_468_2
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2930..4315
DNA (1386bp) protein (462aa)
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XIV6_9PORP
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein {ECO:0000313|EMBL:EJZ63805.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
membrane protein
L3_072_000M1_scaffold_468_3
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4393..5544)
DNA (1152bp) protein (384aa)
Galactokinase n=2 Tax=Bacteroidales RepID=K0WZR9_9PORP
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
galactokinase
L3_072_000M1_scaffold_468_4
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5579..6658)
DNA (1080bp) protein (360aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
Aldose 1-epimerase n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WX45_9PORP
aldose 1-epimerase
L3_072_000M1_scaffold_468_5
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7065..7646)
DNA (582bp) protein (194aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WWZ8_9PORP
7-carboxy-7-deazaguanine synthase
L3_072_000M1_scaffold_468_6
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7643..8002)
DNA (360bp) protein (120aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X7Y3_9PORP
Queuosine biosynthesis protein QueD {ECO:0000313|EMBL:EJZ63809.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
6-pyruvoyl-tetrahydropterin synthase
L3_072_000M1_scaffold_468_7
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8028..8681)
DNA (654bp) protein (218aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
7-cyano-7-deazaguanine synthase n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XIW2_9PORP
7-cyano-7-deazaguanine synthase
L3_072_000M1_scaffold_468_8
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9046..9474
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ER85_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95190.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L3_072_000M1_scaffold_468_9
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9549..9848
DNA (300bp) protein (100aa)
Thioredoxin n=2 Tax=Bacteroidales RepID=K0WX49_9PORP
Thioredoxin {ECO:0000313|EMBL:CCX95189.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
thioredoxin
L3_072_000M1_scaffold_468_10
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10136..10711
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WX03_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ63813.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
chromate transporter
L3_072_000M1_scaffold_468_11
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10714..11268
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F345_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95187.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
chromate transporter
L3_072_000M1_scaffold_468_12
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11306..12598
DNA (1293bp) protein (431aa)
FolC protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XIW5_9PORP
FolC protein {ECO:0000313|EMBL:EJZ63815.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
dihydrofolate synthase
L3_072_000M1_scaffold_468_13
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12579..12956)
DNA (378bp) protein (126aa)
Endoribonuclease L-PSP n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ER80_9BACE
Endoribonuclease L-PSP {ECO:0000313|EMBL:CCX95185.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
endoribonuclease L-PSP
L3_072_000M1_scaffold_468_14
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12958..14343)
DNA (1386bp) protein (462aa)
YihY family protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EV20_9BACE
YihY family protein {ECO:0000313|EMBL:CCX95184.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
ribonuclease BN
L3_072_000M1_scaffold_468_15
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14995..16494
DNA (1500bp) protein (500aa)
Peptidase Do n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WX09_9PORP
Peptidase Do {ECO:0000313|EMBL:EJZ63818.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
type I deoxyribonuclease HsdR
L3_072_000M1_scaffold_468_16
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16733..17593
DNA (861bp) protein (287aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Bacteroidales RepID=K0X7Y9_9PORP
RNA polymerase sigma factor rpoD
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CCX95181.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L3_072_000M1_scaffold_468_17
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17748..18362
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0XIX0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95180.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L3_072_000M1_scaffold_468_18
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18663..20159
DNA (1497bp) protein (499aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
2-isopropylmalate synthase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EV15_9BACE
2-isopropylmalate synthase
L3_072_000M1_scaffold_468_19
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20169..21563
DNA (1395bp) protein (465aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ERL6_9BACE
3-isopropylmalate dehydratase large subunit
L3_072_000M1_scaffold_468_20
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21576..22166
DNA (591bp) protein (197aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
3-isopropylmalate dehydratase small subunit n=2 Tax=Bacteroidales RepID=K0WX13_9PORP
3-isopropylmalate dehydratase small subunit
L3_072_000M1_scaffold_468_21
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22184..23722
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F4L8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95176.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
2-isopropylmalate synthase
L3_072_000M1_scaffold_468_22
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23735..24808
DNA (1074bp) protein (358aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
3-isopropylmalate dehydrogenase n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XIX4_9PORP
3-isopropylmalate dehydrogenase
L3_072_000M1_scaffold_468_23
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24881..26068)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EV10_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95174.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L3_072_000M1_scaffold_468_24
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26348..27217
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0WX65_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95173.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L3_072_000M1_scaffold_468_25
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27292..28452
DNA (1161bp) protein (387aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F331_9BACE
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L3_072_000M1_scaffold_468_26
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28467..29789
DNA (1323bp) protein (441aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
RIP metalloprotease RseP n=2 Tax=Bacteroidales RepID=K0X7Z5_9PORP
zinc metalloprotease
L3_072_000M1_scaffold_468_27
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29796..30980
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XIX9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ63830.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
SAM-dependent methyltransferase
L3_072_000M1_scaffold_468_28
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31027..33057
DNA (2031bp) protein (677aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0WZU8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95169.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
dihydrofolate reductase
L3_072_000M1_scaffold_468_29
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33227..33868
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0WX68_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95168.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
peptidase
L3_072_000M1_scaffold_468_30
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33924..34394
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0WX22_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95167.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
iron transporter
Displaying items 1-30 of 42 in total

View Taxonomy