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L3_072_000M1_scaffold_498

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_498_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(277..2721)
DNA (2445bp) protein (815aa)
Polysaccharide biosynthesis/export protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AKH1_9PORP
Polysaccharide biosynthesis/export protein {ECO:0000313|EMBL:EDN84493.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
capsule polysaccharide export protein
L3_072_000M1_scaffold_498_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2718..3716)
DNA (999bp) protein (333aa)
UDP-N-acetylglucosamine 2-epimerase n=2 Tax=Parabacteroides merdae RepID=A7AKH0_9PORP
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EDN84492.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
UDP-N-acetylglucosamine 2-epimerase
L3_072_000M1_scaffold_498_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3728..4435)
DNA (708bp) protein (236aa)
Glycosyltransferase WecB/TagA/CpsF family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVJ3_9PORP
Glycosyltransferase WecB/TagA/CpsF family {ECO:0000313|EMBL:CDD13350.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyl transferase family protein
L3_072_000M1_scaffold_498_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4432..4860)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z8C5_9PORP
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:CDD13349.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
acetyltransferase
L3_072_000M1_scaffold_498_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4863..5762)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPW0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13348.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_498_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5822..6871)
DNA (1050bp) protein (350aa)
Glycosyltransferase group 1 family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y4M7_9PORP
Glycosyltransferase group 1 family protein {ECO:0000313|EMBL:CDD13347.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_498_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6858..8147)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XAG6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13346.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_072_000M1_scaffold_498_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8125..9099)
DNA (975bp) protein (325aa)
Glycosyltransferase group 1 family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVI6_9PORP
Glycosyltransferase group 1 family protein {ECO:0000313|EMBL:CDD13345.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyl transferase family protein
L3_072_000M1_scaffold_498_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9102..10631)
DNA (1530bp) protein (510aa)
Polysaccharide biosynthesis protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X2J7_9PORP
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDD13344.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_498_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10642..11850)
DNA (1209bp) protein (403aa)
Nucleotide sugar dehydrogenase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPV6_9PORP
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CDD13343.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative UDP-ManNAc dehydrogenase
L3_072_000M1_scaffold_498_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11865..13001)
DNA (1137bp) protein (379aa)
Glycosyltransferase group 4 family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y4M3_9PORP
Glycosyltransferase group 4 family {ECO:0000313|EMBL:CDD13342.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase
L3_072_000M1_scaffold_498_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13662..14825)
DNA (1164bp) protein (388aa)
Acyltransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XAG0_9PORP
Acyltransferase {ECO:0000313|EMBL:CDD13341.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
acyltransferase
L3_072_000M1_scaffold_498_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14907..15470)
DNA (564bp) protein (188aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVH9_9PORP
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CDD13340.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_498_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15596..16693)
DNA (1098bp) protein (366aa)
Phosphotransferase enzyme family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X2J0_9PORP
Phosphotransferase enzyme family {ECO:0000313|EMBL:CDD13339.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_498_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(16912..17166)
DNA (255bp) protein (85aa)
50S ribosomal protein L31 type B n=4 Tax=Parabacteroides RepID=A7AKF5_9PORP
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
rpmE2; 50S ribosomal protein L31
L3_072_000M1_scaffold_498_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17397..18395
DNA (999bp) protein (333aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=4 Tax=Parabacteroides RepID=A7AKF4_9PORP
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EKN07358.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_072_000M1_scaffold_498_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18492..19112
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XAF1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13336.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_498_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19176..21302)
DNA (2127bp) protein (709aa)
HRDC domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVH3_9PORP
HRDC domain protein {ECO:0000313|EMBL:CDD13335.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
helicase
L3_072_000M1_scaffold_498_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21401..22999)
DNA (1599bp) protein (533aa)
TrkA C-terminal domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X2I2_9PORP
TrkA C-terminal domain protein {ECO:0000313|EMBL:EDN84471.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transporter
L3_072_000M1_scaffold_498_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23016..23891
DNA (876bp) protein (292aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPU9_9PORP
L3_072_000M1_scaffold_498_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23950..24846
DNA (897bp) protein (299aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZLA9_9PORP
Putative membrane protein {ECO:0000313|EMBL:EDN84470.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
permease
L3_072_000M1_scaffold_498_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24891..25523
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XAE6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13331.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_498_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25541..26026)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVG7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13330.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_498_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26030..26695
DNA (666bp) protein (222aa)
Sigma-70 region 2 n=2 Tax=Parabacteroides merdae RepID=A7AKE5_9PORP
Sigma-70 region 2 {ECO:0000313|EMBL:EDN84467.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RNA polymerase ECF-type sigma factor
L3_072_000M1_scaffold_498_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26713..27258
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPU4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13328.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_498_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27271..27735
DNA (465bp) protein (155aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AKE3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13327.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_498_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27756..28667
DNA (912bp) protein (304aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AKE2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13326.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_498_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29184..29372
DNA (189bp) protein (63aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AKE0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13325.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_072_000M1_scaffold_498_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29535..31058
DNA (1524bp) protein (508aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein purH n=2 Tax=Parabacteroides merdae RepID=K6AVS2_9PORP
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_072_000M1_scaffold_498_30
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31166..32185
DNA (1020bp) protein (340aa)
Cell shape determining protein, MreB/Mrl family n=7 Tax=Parabacteroides RepID=A7AKD8_9PORP
MreB/Mrl family cell shape determining protein {ECO:0000313|EMBL:EKN12328.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
rod shape-determining protein MreB
Displaying items 1-30 of 40 in total

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