ggKbase home page

L3_072_000M1_scaffold_502

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_502_1
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..485
DNA (483bp) protein (161aa)
Phosphotyrosine protein phosphatase n=1 Tax=Prevotella copri CAG:164 RepID=R6C4F4_9BACT
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CDA66341.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_072_000M1_scaffold_502_2
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(562..1644)
DNA (1083bp) protein (361aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase {ECO:0000313|EMBL:EFB36039.1}; EC=2.1.1.61 {ECO:0000313|EMBL:EFB36039.1};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PB82_9BACT
L3_072_000M1_scaffold_502_3
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1917..3605
DNA (1689bp) protein (563aa)
TrkA C-terminal domain protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PB81_9BACT
TrkA C-terminal domain protein {ECO:0000313|EMBL:EFB36038.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
transporter
L3_072_000M1_scaffold_502_4
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3612..5063
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BQ32_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA66238.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_072_000M1_scaffold_502_5
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5242..6153
DNA (912bp) protein (304aa)
Transcriptional regulator HTH_1 family n=2 Tax=root RepID=R6CLS8_9BACT
Transcriptional regulator HTH_1 family {ECO:0000313|EMBL:CDA66237.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
LysR family transcriptional regulator
L3_072_000M1_scaffold_502_6
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6339..7220)
DNA (882bp) protein (294aa)
Putative membrane protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C457_9BACT
Putative membrane protein {ECO:0000313|EMBL:CDA66236.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
membrane protein
L3_072_000M1_scaffold_502_7
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7450..8322
DNA (873bp) protein (291aa)
Aldose epimerase family protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BSK9_9BACT
Aldose epimerase family protein {ECO:0000313|EMBL:CDA66235.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_072_000M1_scaffold_502_8
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8322..10301
DNA (1980bp) protein (660aa)
Oligopeptide transporter, OPT family n=2 Tax=root RepID=D1PB75_9BACT
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:EFB36032.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
putative transmembrane oligopeptide transporter
L3_072_000M1_scaffold_502_9
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10390..12063)
DNA (1674bp) protein (558aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PB74_9BACT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFB36031.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
sensor histidine kinase/DNA-binding response regulator
L3_072_000M1_scaffold_502_10
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12132..12908
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C6T0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA67131.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
glycoside hydrolase
L3_072_000M1_scaffold_502_11
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12931..15384
DNA (2454bp) protein (818aa)
Glycoside hydrolase family 43 n=1 Tax=Prevotella copri CAG:164 RepID=R6CPH1_9BACT
Glycoside hydrolase family 43 {ECO:0000313|EMBL:CDA67132.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
glycoside hydrolase
L3_072_000M1_scaffold_502_12
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15396..17870
DNA (2475bp) protein (825aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BSQ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA67133.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_072_000M1_scaffold_502_13
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18276..19709)
DNA (1434bp) protein (478aa)
PepSY domain protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PB69_9BACT
PepSY domain protein {ECO:0000313|EMBL:EFB36026.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
peptidase
L3_072_000M1_scaffold_502_14
unknown

Not on your lists

comp(19699..19857)
DNA (159bp) protein (53aa)

This feature has no annotations

L3_072_000M1_scaffold_502_15
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20429..21343)
DNA (915bp) protein (305aa)
Putative AraC-type transcription regulator n=1 Tax=Prevotella copri CAG:164 RepID=R6BYH6_9BACT
Putative AraC-type transcription regulator {ECO:0000313|EMBL:CDA66039.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
AraC family transcriptional regulator
L3_072_000M1_scaffold_502_16
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21394..22326)
DNA (933bp) protein (311aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
rsgA; ribosome small subunit-dependent GTPase A (EC:3.6.-.-)
Putative ribosome biogenesis GTPase RsgA n=3 Tax=root RepID=D1PB67_9BACT
L3_072_000M1_scaffold_502_17
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22361..22921)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=3 Tax=root RepID=D1PB66_9BACT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
frr; ribosome recycling factor
L3_072_000M1_scaffold_502_18
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(22934..23743)
DNA (810bp) protein (270aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=2 Tax=root RepID=R6C3K1_9BACT
L3_072_000M1_scaffold_502_19
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23960..24970
DNA (1011bp) protein (337aa)
Putative membrane protein n=2 Tax=root RepID=R6BS50_9BACT
Putative membrane protein {ECO:0000313|EMBL:CDA66035.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_072_000M1_scaffold_502_20
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25039..26502
DNA (1464bp) protein (488aa)
Aminoacyl-histidine dipeptidase n=1 Tax=Prevotella copri CAG:164 RepID=R6BYH2_9BACT
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:CDA66034.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
pepD_2; Xaa-His dipeptidase
L3_072_000M1_scaffold_502_21
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26822..27748
DNA (927bp) protein (309aa)
Transporter n=1 Tax=Prevotella copri CAG:164 RepID=R6BPJ4_9BACT
Transporter {ECO:0000313|EMBL:CDA66033.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
CorA-like protein
L3_072_000M1_scaffold_502_22
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27987..29753
DNA (1767bp) protein (589aa)
Uncharacterized protein n=2 Tax=root RepID=R6C3J7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA66031.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_072_000M1_scaffold_502_23
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30250..30609
DNA (360bp) protein (120aa)
Ribosomal silencing factor RsfS n=2 Tax=Prevotella RepID=D1PB59_9BACT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
iojap-like ribosome-associated protein
L3_072_000M1_scaffold_502_24
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30680..32770
DNA (2091bp) protein (697aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Prevotella copri CAG:164 RepID=R6BYG7_9BACT
ATP-dependent metalloprotease FtsH
L3_072_000M1_scaffold_502_25
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32782..33648
DNA (867bp) protein (289aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Phosphatidate cytidylyltransferase n=1 Tax=Prevotella copri CAG:164 RepID=R6BPJ1_9BACT
CDP-diglyceride synthetase
L3_072_000M1_scaffold_502_26
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33808..34761)
DNA (954bp) protein (318aa)
Cellulase (glycosyl hydrolase family 5). (EC:3.2.1.4)
Endoglucanase n=1 Tax=Prevotella sp. CAG:732 RepID=R6X891_9BACT
Endoglucanase {ECO:0000313|EMBL:CDD17780.1}; TaxID=1262934 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
L3_072_000M1_scaffold_502_27
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34916..36379)
DNA (1464bp) protein (488aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=2 Tax=root RepID=R6C3J2_9BACT
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:CDA66026.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L3_072_000M1_scaffold_502_28
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36376..37140)
DNA (765bp) protein (255aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
5'-nucleotidase SurE n=1 Tax=Prevotella copri DSM 18205 RepID=D1PB54_9BACT
surE; survival protein
L3_072_000M1_scaffold_502_29
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37157..38005
DNA (849bp) protein (283aa)
Sporulation initiation inhibitor protein Soj n=1 Tax=Prevotella copri CAG:164 RepID=R6BYG5_9BACT
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:CDA66024.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
ATPase involved in chromosome partitioning
L3_072_000M1_scaffold_502_30
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38038..38973
DNA (936bp) protein (312aa)
ParB-like protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PB52_9BACT
ParB-like protein {ECO:0000313|EMBL:EFB36009.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
putative stage 0 sporulation protein J
Displaying items 1-30 of 36 in total

View Taxonomy