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L3_072_000M1_scaffold_506

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_506_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(663..833)
DNA (171bp) protein (57aa)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=A7ADB2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87054.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_506_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(826..1326)
DNA (501bp) protein (167aa)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=K6AER7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC94661.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L3_072_000M1_scaffold_506_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1313..1570)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K5YVA5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07014.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_072_000M1_scaffold_506_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1575..2702)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZUA3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07013.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
coproporphyrinogen III oxidase
L3_072_000M1_scaffold_506_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2917..5073
DNA (2157bp) protein (719aa)
Translation elongation factor G n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X5Q3_9PORP
Translation elongation factor G {ECO:0000313|EMBL:CDD11551.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
fusA; elongation factor G
L3_072_000M1_scaffold_506_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5201..6001
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z6K1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07011.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
phosphoesterase
L3_072_000M1_scaffold_506_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5998..7152
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WK94_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11553.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyltransferase
L3_072_000M1_scaffold_506_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7289..8566)
DNA (1278bp) protein (426aa)
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQD1_9PORP
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:CDD11555.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_072_000M1_scaffold_506_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8630..9958)
DNA (1329bp) protein (443aa)
MATE efflux family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X5Q8_9PORP
MATE efflux family protein {ECO:0000313|EMBL:CDD11556.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_506_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10177..11928)
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XZD7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11557.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
TonB-dependent receptor
L3_072_000M1_scaffold_506_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11938..14937)
DNA (3000bp) protein (1000aa)
Tetratricopeptide repeat protein n=2 Tax=Parabacteroides merdae RepID=A7ADA2_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDN87044.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_506_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15018..15533)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WXA8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11559.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
mutT family protein
L3_072_000M1_scaffold_506_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15637..16599)
DNA (963bp) protein (321aa)
ROK family protein n=3 Tax=Parabacteroides RepID=A7ADA0_9PORP
ROK family protein {ECO:0000313|EMBL:EDN87041.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional repressor
L3_072_000M1_scaffold_506_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16720..17097)
DNA (378bp) protein (126aa)
Glyoxalase family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X5R0_9PORP
Glyoxalase family protein {ECO:0000313|EMBL:CDD11561.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
lactoylglutathione lyase
L3_072_000M1_scaffold_506_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17126..17848)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XZE0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11562.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
metal dependent hydrolase
L3_072_000M1_scaffold_506_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17947..19128)
DNA (1182bp) protein (394aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WKA0_9PORP
phosphoribosylglycinamide formyltransferase
L3_072_000M1_scaffold_506_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19487..20170
DNA (684bp) protein (228aa)
ABC transporter ATP-binding protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WXB2_9PORP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD11564.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ABC transporter ATP-binding protein
L3_072_000M1_scaffold_506_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20163..21428
DNA (1266bp) protein (422aa)
Efflux ABC transporter, permease protein n=2 Tax=Parabacteroides merdae RepID=A7AD94_9PORP
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDN87036.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
efflux ABC transporter permease
L3_072_000M1_scaffold_506_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21453..22721
DNA (1269bp) protein (423aa)
Efflux ABC transporter permease protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XZE4_9PORP
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD11567.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
efflux ABC transporter permease
L3_072_000M1_scaffold_506_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22801..23922
DNA (1122bp) protein (374aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Parabacteroides merdae RepID=A7AD92_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EDN87034.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
membrane fusion efflux protein
L3_072_000M1_scaffold_506_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23940..25289
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BAH0_9PORP
Outer membrane efflux protein {ECO:0000313|EMBL:EDN87033.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
outer membrane transport/efflux protein
L3_072_000M1_scaffold_506_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25457..27457
DNA (2001bp) protein (667aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPE6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13138.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_506_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27396..28589
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BX73_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06989.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
glycoside hydrolase
L3_072_000M1_scaffold_506_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28650..28964)
DNA (315bp) protein (105aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K5ZU77_9PORP
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDN87030.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L3_072_000M1_scaffold_506_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29274..30311
DNA (1038bp) protein (346aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6B9R8_9PORP
F5/8 type C domain protein {ECO:0000313|EMBL:CDD13134.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
beta-glycosidase
L3_072_000M1_scaffold_506_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30327..31487)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPE3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13133.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
conserved hypothetical lipoprotein
L3_072_000M1_scaffold_506_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31585..33777)
DNA (2193bp) protein (731aa)
Glutamate--ammonia ligase, catalytic domain protein n=5 Tax=Parabacteroides RepID=A7AD85_9PORP
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EDN87027.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glutamine synthetase
L3_072_000M1_scaffold_506_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34243..36447)
DNA (2205bp) protein (735aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=3 Tax=Parabacteroides RepID=A7AD83_9PORP
L3_072_000M1_scaffold_506_29
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36628..37467
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5YKI2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14242.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L3_072_000M1_scaffold_506_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37526..39217
DNA (1692bp) protein (564aa)
Alpha amylase, catalytic domain protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AD81_9PORP
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EDN87023.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase family protein
Displaying items 1-30 of 37 in total

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