ggKbase home page

L3_072_000M1_scaffold_515

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_515_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

94..939
DNA (846bp) protein (282aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=3 Tax=Bacteroides RepID=A5ZG78_9BACE
L3_072_000M1_scaffold_515_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

958..1311
DNA (354bp) protein (118aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=3 Tax=Bacteroides RepID=A5ZG79_9BACE
L3_072_000M1_scaffold_515_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1402..3693)
DNA (2292bp) protein (764aa)
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VB56_9BACE
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EIY22517.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta
L3_072_000M1_scaffold_515_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3838..5049)
DNA (1212bp) protein (404aa)
Transporter, major facilitator family protein n=3 Tax=Bacteroides RepID=A5ZG81_9BACE
Glucose/galactose transporter warning {ECO:0000313|EMBL:EIY22518.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative sugar transporter
L3_072_000M1_scaffold_515_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5129..6403)
DNA (1275bp) protein (425aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EDM21192.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EDM21192.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=2 Tax=Bacteroides caccae RepID=A5ZG82_9BACE
L3_072_000M1_scaffold_515_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(6549..6812)
DNA (264bp) protein (88aa)
50S ribosomal protein L27 n=3 Tax=Bacteroides RepID=A5ZG85_9BACE
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
LSU ribosomal protein L27P
L3_072_000M1_scaffold_515_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(6836..7153)
DNA (318bp) protein (106aa)
50S ribosomal protein L21 n=3 Tax=Bacteroides RepID=A5ZG86_9BACE
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
LSU ribosomal protein L21P
L3_072_000M1_scaffold_515_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7369..8004)
DNA (636bp) protein (212aa)
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
HAD hydrolase, family IA n=2 Tax=Bacteroides RepID=I8VB60_9BACE
HAD hydrolase, family IA {ECO:0000313|EMBL:EIY22522.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_000M1_scaffold_515_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8043..8927)
DNA (885bp) protein (295aa)
GumN protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG89_9BACE
GumN protein {ECO:0000313|EMBL:EDM21199.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000M1_scaffold_515_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8962..9474)
DNA (513bp) protein (171aa)
NlpC/P60 family protein n=2 Tax=Bacteroides caccae RepID=A5ZG90_9BACE
NlpC/P60 family protein {ECO:0000313|EMBL:EDM21200.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
lipoprotein
L3_072_000M1_scaffold_515_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9505..10209)
DNA (705bp) protein (235aa)
ABC transporter, ATP-binding protein n=3 Tax=Bacteroides RepID=A5ZG91_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22525.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ABC-type multidrug transport system, ATPase component
L3_072_000M1_scaffold_515_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10248..11741)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG92_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21202.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000M1_scaffold_515_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11758..14595)
DNA (2838bp) protein (946aa)
Predicted Zn-dependent peptidases (EC:3.4.99.-)
Peptidase M16 inactive domain protein n=2 Tax=Bacteroides caccae RepID=A5ZG93_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22527.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_000M1_scaffold_515_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14675..15475)
DNA (801bp) protein (267aa)
3-deoxy-8-phosphooctulonate synthase (EC:2.5.1.55)
3-deoxy-8-phosphooctulonate synthase n=3 Tax=Bacteroides RepID=A5ZG94_9BACE
3-deoxy-8-phosphooctulonate synthase {ECO:0000313|EMBL:EIY22528.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_000M1_scaffold_515_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15555..16481)
DNA (927bp) protein (309aa)
Lipid kinase, YegS/Rv2252/BmrU family n=2 Tax=Bacteroides caccae RepID=A5ZG95_9BACE
YegS//BmrU family lipid kinase {ECO:0000313|EMBL:EIY22529.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
L3_072_000M1_scaffold_515_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16539..17459)
DNA (921bp) protein (307aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=2 Tax=Bacteroides RepID=A5ZG96_9BACE
L3_072_000M1_scaffold_515_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17912..18904)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG97_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21207.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000M1_scaffold_515_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18926..20947)
DNA (2022bp) protein (674aa)
SusD family protein n=2 Tax=Bacteroides RepID=A5ZG98_9BACE
SusD family protein {ECO:0000313|EMBL:EDM21208.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
SusD family.
L3_072_000M1_scaffold_515_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20964..24074)
DNA (3111bp) protein (1037aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG99_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM21209.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Outer membrane receptor for ferrienterochelin and colicins
L3_072_000M1_scaffold_515_20
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24102..24650)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9EQC0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72616.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
NHL repeat protein,IPT/TIG domain-containing protein
L3_072_000M1_scaffold_515_21
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24813..25460)
DNA (648bp) protein (216aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9EQC0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72616.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
IPT/TIG domain.
L3_072_000M1_scaffold_515_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25712..26932)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=3 Tax=Bacteroides caccae RepID=I8V7W7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22535.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000M1_scaffold_515_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26935..28233)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q0D3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22536.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
glycosyl hydrolase family 88
L3_072_000M1_scaffold_515_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28393..32433)
DNA (4041bp) protein (1347aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VB76_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22537.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
histidine kinase
L3_072_000M1_scaffold_515_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32549..35197)
DNA (2649bp) protein (883aa)
TonB-dependent receptor plug domain protein n=2 Tax=Bacteroides caccae RepID=A5ZGA5_9BACE
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:EDM21215.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
TonB-dependent Receptor Plug Domain.
L3_072_000M1_scaffold_515_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35219..36424)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGA6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22539.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000M1_scaffold_515_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36478..37122)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V7X2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22540.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ABC transporter ATP-binding protein
L3_072_000M1_scaffold_515_28
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37139..38686)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3E5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72623.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000M1_scaffold_515_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38732..39433)
DNA (702bp) protein (234aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Ribosomal RNA small subunit methyltransferase E n=3 Tax=root RepID=A5ZGA9_9BACE
16S ribosomal RNA methyltransferase RsmE
L3_072_000M1_scaffold_515_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39441..40043)
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGB0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21220.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
Displaying items 1-30 of 54 in total

View Taxonomy