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L3_072_000M1_scaffold_529

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_529_1
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..198
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K600_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38892.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
L3_072_000M1_scaffold_529_2
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

285..1415
DNA (1131bp) protein (377aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=R9JXT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38893.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L3_072_000M1_scaffold_529_3
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1433..2410
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium 10/96A RepID=U7TW11_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ERT48469.1}; TaxID=1391465 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 10/96A.;"
hypothetical protein
L3_072_000M1_scaffold_529_4
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2400..3320
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium NEF1 RepID=U7T1X2_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ERT48466.1}; TaxID=1391465 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 10/96A.;"
putative DNA modification methylase
L3_072_000M1_scaffold_529_5
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3629..4771
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0IYU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT21565.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
L3_072_000M1_scaffold_529_6
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4771..5808
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0ILK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT21564.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
endonuclease
L3_072_000M1_scaffold_529_7
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5825..6361
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium NEF1 RepID=U7T335_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ERT48460.1}; TaxID=1391465 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 10/96A.;"
hypothetical protein
L3_072_000M1_scaffold_529_8
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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6354..7013
DNA (660bp) protein (220aa)
Putative cysteine peptidase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EL97_9FIRM
Putative cysteine peptidase {ECO:0000313|EMBL:CCX92134.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L3_072_000M1_scaffold_529_9
unknown

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7031..7453
DNA (423bp) protein (141aa)

This feature has no annotations

L3_072_000M1_scaffold_529_10
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7487..9697
DNA (2211bp) protein (737aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1391469 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis BM4654.;"
RecD/TraA family helicase (EC:3.1.11.5)
RecD/TraA family helicase n=1 Tax=Enterococcus faecium NEF1 RepID=U7T1L6_ENTFC
L3_072_000M1_scaffold_529_11
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

9678..10127
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y0W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD29688.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L3_072_000M1_scaffold_529_12
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10143..10877
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0IYU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT21560.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
L3_072_000M1_scaffold_529_13
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10930..11985
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium NEF1 RepID=U7T339_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ERT48455.1}; TaxID=1391465 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 10/96A.;"
DNA primase
L3_072_000M1_scaffold_529_14
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12048..13259)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LE43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS57000.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
putative ATPase (AAA+ superfamily)
L3_072_000M1_scaffold_529_15
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13513..14433
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium NEF1 RepID=U7T1M1_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOS38912.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
plasmid segregation actin-type ATPase ParM
L3_072_000M1_scaffold_529_16
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14447..14809
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0IYT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT21555.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
L3_072_000M1_scaffold_529_17
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14970..15317
DNA (348bp) protein (116aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=R9JXJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38914.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
HTH-type transcriptional regulator type 3
L3_072_000M1_scaffold_529_18
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15503..16822
DNA (1320bp) protein (440aa)
DNA-binding transcriptional activator of the SARP family n=1 Tax=Clostridium sp. CAG:590 RepID=R5EDF5_9CLOT
DNA-binding transcriptional activator of the SARP family {ECO:0000313|EMBL:CCX86091.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
DNA-binding transcriptional activator of the SARP family
L3_072_000M1_scaffold_529_19
unknown

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17174..17413
DNA (240bp) protein (80aa)

This feature has no annotations

L3_072_000M1_scaffold_529_20
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17564..17755
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JY97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38916.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
DNA-directed RNA polymerase
L3_072_000M1_scaffold_529_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18255..18488
DNA (234bp) protein (78aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E2SKX4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98927.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_072_000M1_scaffold_529_22
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18544..19779
DNA (1236bp) protein (412aa)
Phage integrase n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GES4_EUBLK
phage integrase
Phage integrase {ECO:0000313|EMBL:ADO37754.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_072_000M1_scaffold_529_23
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20143..21066
DNA (924bp) protein (308aa)
Thioredoxin reductase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AMS1_9CLOT
Thioredoxin reductase {ECO:0000313|EMBL:CCX42077.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
thioredoxin reductase
L3_072_000M1_scaffold_529_24
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21072..22430
DNA (1359bp) protein (453aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Phosphoglucosamine mutase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B1S4_9CLOT
phosphoglucosamine mutase
L3_072_000M1_scaffold_529_25
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22485..22736)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5D9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49419.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_072_000M1_scaffold_529_26
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22911..24302
DNA (1392bp) protein (464aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
glyS; glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Clostridium sp. CAG:138 RepID=R6B290_9CLOT
L3_072_000M1_scaffold_529_27
unknown

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24502..25833
DNA (1332bp) protein (444aa)

This feature has no annotations

L3_072_000M1_scaffold_529_28
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25859..26119)
DNA (261bp) protein (87aa)
GIY-YIG catalytic domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWU0_9CLOT
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:EDO60237.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
putative endonuclease containing a URI domain
L3_072_000M1_scaffold_529_29
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26119..26778)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GD50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG79135.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
hypothetical protein
L3_072_000M1_scaffold_529_30
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26869..28671
DNA (1803bp) protein (601aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
Elongation factor 4 n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AUL2_9CLOT
GTP-binding protein LepA
Displaying items 1-30 of 49 in total

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