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L3_072_000M1_scaffold_548

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_548_1
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

254..376
DNA (123bp) protein (41aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AQC8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB47869.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_072_000M1_scaffold_548_2
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(411..1457)
DNA (1047bp) protein (349aa)
Inner membrane protein YhiM n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IVI5_9BACE
Inner membrane protein YhiM {ECO:0000313|EMBL:EFI07345.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_072_000M1_scaffold_548_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1494..2321
DNA (828bp) protein (276aa)
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
Type III pantothenate kinase n=5 Tax=Bacteroidales RepID=A6L8F4_PARD8
L3_072_000M1_scaffold_548_4
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2308..3591
DNA (1284bp) protein (428aa)
Outer membrane protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IVI7_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFI07347.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
outer membrane protein
L3_072_000M1_scaffold_548_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3676..5040
DNA (1365bp) protein (455aa)
Tetratricopeptide repeat protein n=4 Tax=Bacteroidales RepID=C7XFV5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN26408.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_072_000M1_scaffold_548_6
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5079..5708
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IVI9_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI07349.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_072_000M1_scaffold_548_7
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5710..6963
DNA (1254bp) protein (418aa)
CBS domain protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TIT3_9BACE
CBS domain protein {ECO:0000313|EMBL:EEY82037.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hemolysin
L3_072_000M1_scaffold_548_8
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7060..7182
DNA (123bp) protein (41aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5Z7P7_9PORP
peptidyl-prolyl cis-trans isomerase
L3_072_000M1_scaffold_548_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7252..9195
DNA (1944bp) protein (648aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Peptidyl-prolyl cis-trans isomerase n=9 Tax=Bacteroidales RepID=A6L8F9_PARD8
peptidyl-prolyl cis-trans isomerase
L3_072_000M1_scaffold_548_10
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9332..10363
DNA (1032bp) protein (344aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Probable dual-specificity RNA methyltransferase RlmN n=3 Tax=Bacteroidales RepID=D0TIT1_9BACE
ribosomal RNA large subunit methyltransferase N
L3_072_000M1_scaffold_548_11
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10380..11417
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TIT0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82034.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_072_000M1_scaffold_548_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11434..12543
DNA (1110bp) protein (370aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IVJ4_9BACE
4-hydroxythreonine-4-phosphate dehydrogenase
L3_072_000M1_scaffold_548_13
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12712..13179
DNA (468bp) protein (156aa)
Glycerol-3-phosphate cytidylyltransferase n=9 Tax=Bacteroidales RepID=A6L8G3_PARD8
glycerol-3-phosphate cytidylyltransferase
Putative glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:EEY82032.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_072_000M1_scaffold_548_14
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13191..13919
DNA (729bp) protein (243aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TIS7_9BACE
short chain dehydrogenase/reductase family oxidoreductase
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:EFI07356.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_072_000M1_scaffold_548_15
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13927..14814
DNA (888bp) protein (296aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6L8G5_PARD8
hypothetical protein
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:EFK63822.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_072_000M1_scaffold_548_16
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14818..15645
DNA (828bp) protein (276aa)
Acyltransferase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TIS5_9BACE
Acyltransferase {ECO:0000313|EMBL:EEY82029.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hemolysin
L3_072_000M1_scaffold_548_17
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15750..16940
DNA (1191bp) protein (397aa)
Sigma-54 interaction domain protein n=7 Tax=Bacteroidales RepID=C7XFU4_9PORP
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EFK63824.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
transcriptional regulator
L3_072_000M1_scaffold_548_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16945..17481
DNA (537bp) protein (179aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6L8G8_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN26420.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_072_000M1_scaffold_548_19
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17483..18250
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XFU2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU49215.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_072_000M1_scaffold_548_20
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18258..18641
DNA (384bp) protein (128aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6L8H0_PARD8
secG; preprotein translocase subunit SecG
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EFI07362.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_072_000M1_scaffold_548_21
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18940..19254
DNA (315bp) protein (105aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=C7XFU0_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEY82024.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_072_000M1_scaffold_548_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19306..19506
DNA (201bp) protein (67aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=C7XEM7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN26424.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_072_000M1_scaffold_548_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19516..19842)
DNA (327bp) protein (109aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6L8H2_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR41986.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_072_000M1_scaffold_548_24
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20197..20724)
DNA (528bp) protein (176aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
6,7-dimethyl-8-ribityllumazine synthase n=9 Tax=Bacteroidales RepID=RISB_PARD8
ribH; 6,7-dimethyl-8-ribityllumazine synthase
L3_072_000M1_scaffold_548_25
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20756..21439)
DNA (684bp) protein (228aa)
TPR domain protein n=6 Tax=Bacteroidales RepID=A6L8H4_PARD8
hypothetical protein
TPR domain protein {ECO:0000313|EMBL:CDB47892.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_072_000M1_scaffold_548_26
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21588..22685
DNA (1098bp) protein (366aa)
DNA replication and repair protein RecF n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IC89_9PORP
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
DNA replication and repair protein
L3_072_000M1_scaffold_548_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22688..22981
DNA (294bp) protein (98aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6L8H6_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK63834.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_072_000M1_scaffold_548_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23091..23546)
DNA (456bp) protein (152aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
5-formyltetrahydrofolate cyclo-ligase n=2 Tax=Bacteroidales RepID=K5ZGJ3_9PORP
5-formyltetrahydrofolate cyclo-ligase
L3_072_000M1_scaffold_548_29
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23551..25284)
DNA (1734bp) protein (578aa)
Peptidase, S41 family {ECO:0000313|EMBL:EFK63836.1}; EC=3.4.21.- {ECO:0000313|EMBL:EFK63836.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Peptidase, S41 family n=3 Tax=Parabacteroides RepID=E1YR29_9PORP
carboxy-terminal processing protease
L3_072_000M1_scaffold_548_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25298..25732)
DNA (435bp) protein (145aa)
Deoxycytidylate deaminase n=8 Tax=Bacteroidales RepID=A6L8H9_PARD8
deoxycytidylate deaminase
Deoxycytidylate deaminase {ECO:0000313|EMBL:ABR41993.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
Displaying items 1-30 of 43 in total

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