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L3_072_000M1_scaffold_553

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_553_1
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..266
DNA (264bp) protein (88aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Clostridium sp. CAG:452 RepID=R6ZA58_9CLOT
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:CDD27357.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
hypothetical protein
L3_072_000M1_scaffold_553_2
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

241..537
DNA (297bp) protein (99aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Clostridium sp. CAG:452 RepID=R6XUE9_9CLOT
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:CDD27358.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
ErfK/YbiS/YcfS/YnhG family protein
L3_072_000M1_scaffold_553_3
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

936..4709
DNA (3774bp) protein (1258aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. CAG:452 RepID=R6Y0F7_9CLOT
DNA-directed RNA polymerase subunit beta
L3_072_000M1_scaffold_553_4
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4921..8463
DNA (3543bp) protein (1181aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium sp. CAG:452 RepID=R6YFI7_9CLOT
L3_072_000M1_scaffold_553_5
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8777..9343
DNA (567bp) protein (189aa)
LemA family protein n=1 Tax=Clostridium sp. CAG:452 RepID=R6XUF5_9CLOT
LemA family protein {ECO:0000313|EMBL:CDD27363.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
LemA family protein
L3_072_000M1_scaffold_553_6
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9327..10172
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:452 RepID=R6Y7T8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD27364.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
hypothetical protein
L3_072_000M1_scaffold_553_7
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10569..11516
DNA (948bp) protein (316aa)
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Clostridium sp. CAG:452 RepID=R6Y0G3_9CLOT
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:CDD27365.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
L3_072_000M1_scaffold_553_8
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11721..11891
DNA (171bp) protein (57aa)
30S ribosomal protein S21 n=1 Tax=Clostridium sp. CAG:452 RepID=R6ZA70_9CLOT
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
30S ribosomal protein S21
L3_072_000M1_scaffold_553_9
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11958..12398
DNA (441bp) protein (147aa)
GatB/YqeY domain protein n=1 Tax=Clostridium sp. CAG:452 RepID=R6Y7U3_9CLOT
GatB/YqeY domain protein {ECO:0000313|EMBL:CDD27369.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
GatB/YqeY
L3_072_000M1_scaffold_553_10
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12423..13694
DNA (1272bp) protein (424aa)
Putative Zn-dependent peptidase n=1 Tax=Clostridium sp. CAG:452 RepID=R6Y0G9_9CLOT
Putative Zn-dependent peptidase {ECO:0000313|EMBL:CDD27370.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
peptidase M16 domain-containing protein
L3_072_000M1_scaffold_553_11
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13877..15166
DNA (1290bp) protein (430aa)
Peptidase M16 domain protein n=1 Tax=Clostridium sp. CAG:452 RepID=R6ZA78_9CLOT
Peptidase M16 domain protein {ECO:0000313|EMBL:CDD27372.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
peptidase M16 domain-containing protein
L3_072_000M1_scaffold_553_12
Clostridium sp. CAG:571, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15189..15353
DNA (165bp) protein (55aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1262822 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:571.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium sp. CAG:571 RepID=R5Y3M4_9CLOT
lgt; Prolipoprotein diacylglyceryl transferase
L3_072_000M1_scaffold_553_13
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15364..15666
DNA (303bp) protein (101aa)
lgt; Prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium sp. CAG:452 RepID=R6Y7U9_9CLOT
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:CDD27374.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
L3_072_000M1_scaffold_553_14
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15695..16216
DNA (522bp) protein (174aa)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium sp. CAG:452 RepID=R6YFK4_9CLOT
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:CDD27376.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
prolipoprotein diacylglyceryl transferase
L3_072_000M1_scaffold_553_15
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16379..16546
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:452 RepID=R6XUH1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD27378.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
hypothetical protein
L3_072_000M1_scaffold_553_16
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16763..17128
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:356 RepID=R7A452_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37507.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
L3_072_000M1_scaffold_553_17
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17356..17658
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LQJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE90810.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
L3_072_000M1_scaffold_553_18
Clostridium sp. CAG:273, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17645..18835
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:273 RepID=R7L9B7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE84568.1}; TaxID=1262789 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:273.;"
hypothetical protein
L3_072_000M1_scaffold_553_19
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18795..20753
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:452 RepID=R6ZA94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD27387.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
Type IV secretory pathway VirB4 components-like protein
L3_072_000M1_scaffold_553_20
unknown

Not on your lists

comp(20811..21098)
DNA (288bp) protein (96aa)

This feature has no annotations

L3_072_000M1_scaffold_553_21
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21230..21577
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N6J1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06710.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L3_072_000M1_scaffold_553_22
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21589..21984
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NEA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06709.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L3_072_000M1_scaffold_553_23
unknown

Not on your lists

22002..24818
DNA (2817bp) protein (939aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F6D8_9CLOT
L3_072_000M1_scaffold_553_24
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24874..25821
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:452 RepID=R6Y0I9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD27390.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
L3_072_000M1_scaffold_553_25
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25832..29143
DNA (3312bp) protein (1104aa)
Putative hydrolase n=1 Tax=Clostridium sp. CAG:575 RepID=R6HE75_9CLOT
Putative hydrolase {ECO:0000313|EMBL:CDB32254.1}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
putative phage tail tape measure protein
L3_072_000M1_scaffold_553_26
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29167..30492
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:575 RepID=R6H3C8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB32253.1}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
L3_072_000M1_scaffold_553_27
unknown

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30507..31829
DNA (1323bp) protein (441aa)

This feature has no annotations

L3_072_000M1_scaffold_553_28
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31867..32529)
DNA (663bp) protein (221aa)
DnaJ domain protein n=1 Tax=Clostridium sp. CAG:470 RepID=R7FFH6_9CLOT
DnaJ domain protein {ECO:0000313|EMBL:CDE14069.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
heat shock protein DnaJ domain protein
L3_072_000M1_scaffold_553_29
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32663..32851
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:452 RepID=R6Y7W7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD27399.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
L3_072_000M1_scaffold_553_30
Clostridium sp. CAG:780, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33061..33414
DNA (354bp) protein (118aa)
Uncharacterized protein YkwD family n=1 Tax=Clostridium sp. CAG:780 RepID=R5Q802_9CLOT
Uncharacterized protein YkwD family {ECO:0000313|EMBL:CCZ18386.1}; TaxID=1262839 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:780.;"
SCP-like extracellular protein
Displaying items 1-30 of 37 in total

View Taxonomy