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L3_072_000M1_scaffold_570

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_570_1
unknown

Not on your lists

comp(3..74)
DNA (72bp) protein (24aa)

This feature has no annotations

L3_072_000M1_scaffold_570_2
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(615..2153)
DNA (1539bp) protein (513aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WEG5_9FIRM
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDD02531.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_072_000M1_scaffold_570_3
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2175..4184)
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VZK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD02530.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_072_000M1_scaffold_570_4
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4197..5504)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QXL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40515.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein predicted by Glimmer/Critica
L3_072_000M1_scaffold_570_5
Clostridium sp. CAG:594, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5576..6262)
DNA (687bp) protein (229aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Clostridium sp. CAG:594 RepID=R6CWX5_9CLOT
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDA80170.1}; TaxID=1262826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:594.;"
ABC transporter ATP-binding protein
L3_072_000M1_scaffold_570_6
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6273..7574)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:253 RepID=R6MXU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB90667.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
L3_072_000M1_scaffold_570_7
unknown

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comp(7571..8059)
DNA (489bp) protein (163aa)

This feature has no annotations

L3_072_000M1_scaffold_570_8
unknown

Not on your lists

comp(8128..8691)
DNA (564bp) protein (188aa)

This feature has no annotations

L3_072_000M1_scaffold_570_9
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8955..9797)
DNA (843bp) protein (281aa)
Carbohydrate binding family 6 n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X824_9FIRM
Carbohydrate binding family 6 {ECO:0000313|EMBL:CDD02522.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
pectinesterase
L3_072_000M1_scaffold_570_10
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9839..11074)
DNA (1236bp) protein (412aa)
Recombination factor protein RarA n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VZJ6_9FIRM
Recombination factor protein RarA {ECO:0000313|EMBL:CDD02520.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
Recombination protein MgsA
L3_072_000M1_scaffold_570_11
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11079..11924)
DNA (846bp) protein (282aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W732_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
conserved hypothetical integral membrane protein TIGR00023
L3_072_000M1_scaffold_570_12
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

12146..12904
DNA (759bp) protein (253aa)
Putative uncharacterized protein id=4165703 bin=GWF2_Clostridiales_36_10 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein
Tax=GWF2_Clostridiales_36_10_curated
L3_072_000M1_scaffold_570_13
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13718..15796
DNA (2079bp) protein (693aa)
Putative glycoside hydrolase BT_3595 n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VTL8_9FIRM
Putative glycoside hydrolase BT_3595 {ECO:0000313|EMBL:CDD02003.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_072_000M1_scaffold_570_14
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15796..16443
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X6G2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD02002.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_072_000M1_scaffold_570_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

16433..19234
DNA (2802bp) protein (934aa)
Alpha-mannosidase {ECO:0000313|EMBL:EFH84657.1}; EC=3.2.1.24 {ECO:0000313|EMBL:EFH84657.1};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Alpha-mannosidase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TWS4_9CHLR
alpha-mannosidase
L3_072_000M1_scaffold_570_16
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19951..20655
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VWG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03023.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_570_17
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20763..21722)
DNA (960bp) protein (320aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
tRNA-dihydrouridine synthase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X9L3_9FIRM
tRNA-dihydrouridine synthase
L3_072_000M1_scaffold_570_18
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(21731..23776)
DNA (2046bp) protein (682aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG id=4165700 bin=GWF2_Clostridiales_36_10 species=Oscillibacter valericigenes genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
L3_072_000M1_scaffold_570_19
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(23773..25986)
DNA (2214bp) protein (738aa)
hypothetical protein Prhi1_05391 id=4165701 bin=GWF2_Clostridiales_36_10 species=Peptoniphilus rhinitidis genus=Peptoniphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein
Tax=GWF2_Clostridiales_36_10_curated
L3_072_000M1_scaffold_570_20
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25976..27103)
DNA (1128bp) protein (376aa)
Metallophosphoesterase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W761_9FIRM
Metallophosphoesterase {ECO:0000313|EMBL:CDD02559.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
putative hydrolase
L3_072_000M1_scaffold_570_21
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(27470..29680)
DNA (2211bp) protein (737aa)
helicase, RecD/TraA family (EC:3.1.11.5)
Helicase, RecD/TraA family id=3610034 bin=GWF2_Clostridiales_36_10 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
L3_072_000M1_scaffold_570_22
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29690..29950)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W8C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03039.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_570_23
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

30280..31461
DNA (1182bp) protein (394aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase id=3610028 bin=GWF2_Clostridiales_36_10 species=Clostridium sp. ASF356 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
L3_072_000M1_scaffold_570_24
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31507..31686)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X9M7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03042.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_570_25
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31791..34346
DNA (2556bp) protein (852aa)
AMP-binding enzyme n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VWH7_9FIRM
AMP-binding enzyme {ECO:0000313|EMBL:CDD03043.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
acyl-CoA synthetase
L3_072_000M1_scaffold_570_26
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34356..34880
DNA (525bp) protein (175aa)
QueT transporter n=1 Tax=Clostridium sp. CAG:413 RepID=R6PT19_9CLOT
QueT transporter {ECO:0000313|EMBL:CDC12932.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_072_000M1_scaffold_570_27
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34988..35476
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W131_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03055.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_072_000M1_scaffold_570_28
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


35507..35695
DNA (189bp) protein (63aa)
50S ribosomal protein L32 n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VWI6_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
rpmF; 50S ribosomal protein L32
L3_072_000M1_scaffold_570_29
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35758..37038
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W133_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03060.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_072_000M1_scaffold_570_30
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37048..38100
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WFY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03066.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
Displaying items 1-30 of 81 in total

View Taxonomy