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L3_072_000M1_scaffold_605

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_605_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13..1557)
DNA (1545bp) protein (515aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CET8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33028.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_072_000M1_scaffold_605_2
Bacillus sp. CMAA 1185, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1554..2177)
DNA (624bp) protein (208aa)
XRE family transcriptional regulator n=1 Tax=Bacillus subtilis RepID=UPI00034D8F9C
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KKB93964.1}; TaxID=1385719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. CMAA 1185.;"
bacteriophage transcriptional regulator
L3_072_000M1_scaffold_605_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2426..2647
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CET7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33027.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_072_000M1_scaffold_605_4
unknown

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2644..2811
DNA (168bp) protein (56aa)

This feature has no annotations

L3_072_000M1_scaffold_605_5
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2808..3494
DNA (687bp) protein (229aa)
Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains) n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GXC0_9FIRM
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains) {ECO:0000313|EMBL:CBL42462.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_072_000M1_scaffold_605_6
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3564..4175
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Dehalobacter sp. UNSWDHB RepID=T0J799_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQB20053.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
hypothetical protein predicted by Glimmer/Critica
L3_072_000M1_scaffold_605_7
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4150..4440
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N1Y0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05025.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L3_072_000M1_scaffold_605_8
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4442..4840
DNA (399bp) protein (133aa)
Archaeal holliday junction resolvase (Hjc) n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GXC2_9FIRM
Archaeal holliday junction resolvase (hjc).
Archaeal holliday junction resolvase (Hjc) {ECO:0000313|EMBL:CBL42464.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_072_000M1_scaffold_605_9
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4831..6228
DNA (1398bp) protein (466aa)
DNA or RNA helicases of superfamily II n=1 Tax=Clostridium leptum CAG:27 RepID=R6P528_9CLOT
DNA or RNA helicases of superfamily II {ECO:0000313|EMBL:CDC05027.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
DNA or RNA helicases of superfamily II
L3_072_000M1_scaffold_605_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6225..6494
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BRR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17181.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_072_000M1_scaffold_605_11
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6491..7408
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Oribacterium sp. ACB7 RepID=G9WTJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL12521.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
DNA-cytosine methyltransferase
L3_072_000M1_scaffold_605_12
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7398..7802
DNA (405bp) protein (135aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=996306 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis R61.;"
Cytosine-specific methyltransferase n=1 Tax=Streptococcus suis R61 RepID=G5KZD8_STRSU
putative DNA methylase
L3_072_000M1_scaffold_605_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7799..9634
DNA (1836bp) protein (612aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CES7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33017.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_072_000M1_scaffold_605_14
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9638..10354
DNA (717bp) protein (239aa)
DNA polymerase elongation subunit (Family B) n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GXC4_9FIRM
DNA polymerase elongation subunit (family B)
DNA polymerase elongation subunit (Family B) {ECO:0000313|EMBL:CBL42466.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_072_000M1_scaffold_605_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10358..11401
DNA (1044bp) protein (348aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CES3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33013.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Phage-related protein, predicted endonuclease
L3_072_000M1_scaffold_605_16
unknown

Not on your lists

11401..11508
DNA (108bp) protein (36aa)

This feature has no annotations

L3_072_000M1_scaffold_605_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11519..11989
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CES2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33012.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_072_000M1_scaffold_605_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12007..12492
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CES1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33011.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_072_000M1_scaffold_605_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12777..13067
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CES0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33010.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_072_000M1_scaffold_605_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13054..13410
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CER9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33009.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
MazG nucleotide pyrophosphohydrolase domain.
L3_072_000M1_scaffold_605_21
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13388..13957
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNT8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42473.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_072_000M1_scaffold_605_22
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13959..14582
DNA (624bp) protein (208aa)
Thymidylate synthase, flavin-dependent n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LUD8_CLOCD
thymidylate synthase, flavin-dependent
Thymidylate synthase, flavin-dependent {ECO:0000313|EMBL:AEV69570.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_072_000M1_scaffold_605_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14670..15020
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CER6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33006.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_072_000M1_scaffold_605_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14995..15249
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CER5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33005.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_072_000M1_scaffold_605_25
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15256..16041
DNA (786bp) protein (262aa)
Primase C terminal 1 (PriCT-1)./Bifunctional DNA primase/polymerase N-terminal n=1 Tax=Clostridium leptum CAG:27 RepID=R6P545_9CLOT
Primase C terminal 1 (PriCT-1)./Bifunctional DNA primase/polymerase N-terminal {ECO:0000313|EMBL:CDC05047.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Primase C terminal 1 (PriCT-1)./Bifunctional DNA primase/polymerase, N-terminal.
L3_072_000M1_scaffold_605_26
unknown

Not on your lists

16044..16256
DNA (213bp) protein (71aa)

This feature has no annotations

L3_072_000M1_scaffold_605_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16234..17739
DNA (1506bp) protein (502aa)
Phage/plasmid primase, P4 family domain-containing protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CER1_9FIRM
Phage/plasmid primase, P4 family domain-containing protein {ECO:0000313|EMBL:EHO33001.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
phage/plasmid primase, P4 family, C-terminal domain
L3_072_000M1_scaffold_605_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17904..18500
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32997.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_072_000M1_scaffold_605_29
unknown

Not on your lists

comp(18554..18820)
DNA (267bp) protein (89aa)

This feature has no annotations

L3_072_000M1_scaffold_605_30
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18817..19566)
DNA (750bp) protein (250aa)
FtsK/SpoIIIE family protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ILT6_9FIRM
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:CDE51597.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
DNA segregation ATPase, FtsK/SpoIIIE family
Displaying items 1-30 of 58 in total

View Taxonomy