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L3_072_000M1_scaffold_610

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_610_1
unknown

Not on your lists

comp(2..109)
DNA (108bp) protein (36aa)

This feature has no annotations

L3_072_000M1_scaffold_610_2
Clostridium sp. CAG:1193, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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390..1079
DNA (690bp) protein (230aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1262771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1193.;"
putative thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Clostridium sp. CAG:1193 RepID=R5IRP1_9CLOT
L3_072_000M1_scaffold_610_3
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1094..1672)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:914 RepID=R7M5P3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE95711.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
hypothetical protein
L3_072_000M1_scaffold_610_4
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1781..3553
DNA (1773bp) protein (591aa)
UvrABC system protein C n=1 Tax=Clostridium sp. CAG:914 RepID=R7M598_9CLOT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
uvrC; UvrABC system protein C
L3_072_000M1_scaffold_610_5
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3650..4483
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:914 RepID=R7M622_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE95831.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
L3_072_000M1_scaffold_610_6
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4488..5432
DNA (945bp) protein (315aa)
holA; DNA polymerase III, delta subunit (EC:2.7.7.7)
DNA polymerase III n=1 Tax=Clostridium sp. CAG:914 RepID=R7M7W4_9CLOT
DNA polymerase III {ECO:0000313|EMBL:CDE95832.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
L3_072_000M1_scaffold_610_7
Clostridium sp. CAG:1193, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5504..7384
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1193 RepID=R5IZF7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY45749.1}; TaxID=1262771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1193.;"
L3_072_000M1_scaffold_610_8
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7501..12174
DNA (4674bp) protein (1558aa)
FG-GAP repeat protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MFK8_9CLOT
FG-GAP repeat protein {ECO:0000313|EMBL:CDE98723.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
type 1 dockerin
L3_072_000M1_scaffold_610_9
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12247..14046
DNA (1800bp) protein (600aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
Elongation factor 4 n=1 Tax=Clostridium sp. CAG:914 RepID=R7M8F2_9CLOT
GTP-binding protein LepA
L3_072_000M1_scaffold_610_10
unknown

Not on your lists

14143..14937
DNA (795bp) protein (265aa)

This feature has no annotations

L3_072_000M1_scaffold_610_11
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15047..16471
DNA (1425bp) protein (475aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
tRNA-i(6)A37 thiotransferase enzyme MiaB (EC:1.3.1.74)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Clostridium sp. CAG:914 RepID=R7M698_9CLOT
L3_072_000M1_scaffold_610_12
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16458..16787
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:914 RepID=R7M721_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE96186.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
L3_072_000M1_scaffold_610_13
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16880..17596
DNA (717bp) protein (239aa)
ABC transporter substrate-binding protein family 3 n=1 Tax=Clostridium sp. CAG:914 RepID=R7M563_9CLOT
ABC transporter substrate-binding protein family 3 {ECO:0000313|EMBL:CDE95790.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_072_000M1_scaffold_610_14
Clostridium sp. CAG:533, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17608..18288
DNA (681bp) protein (227aa)
Amino acid ABC transporter permease/substrate-binding protein n=1 Tax=Clostridium sp. CAG:533 RepID=R6B277_9CLOT
Amino acid ABC transporter permease/substrate-binding protein {ECO:0000313|EMBL:CDA53071.1}; TaxID=1262818 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:533.;"
polar amino acid ABC transporter inner membrane subunit
L3_072_000M1_scaffold_610_15
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18281..18994
DNA (714bp) protein (238aa)
Amino acid ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:914 RepID=R7M7C3_9CLOT
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE95788.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
ABC transporter-like protein
L3_072_000M1_scaffold_610_16
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19014..20237
DNA (1224bp) protein (408aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
Arginine deiminase n=1 Tax=Clostridium sp. CAG:914 RepID=R7M7S7_9CLOT
hypothetical protein
L3_072_000M1_scaffold_610_17
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20237..21229
DNA (993bp) protein (331aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
arcB; Ornithine carbamoyltransferase, catabolic (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Clostridium sp. CAG:914 RepID=R7M5Y4_9CLOT
L3_072_000M1_scaffold_610_18
Clostridium sp. CAG:1193, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21207..22178
DNA (972bp) protein (324aa)
arcC; Carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Clostridium sp. CAG:1193 RepID=R5IRN6_9CLOT
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1262771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1193.;"
L3_072_000M1_scaffold_610_19
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

22182..23630
DNA (1449bp) protein (483aa)
Arginine/ornithine antiporter n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5IVC8_9FIRM
Arginine/ornithine antiporter {ECO:0000313|EMBL:CCY46243.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
arginine/ornithine antiporter
L3_072_000M1_scaffold_610_20
Coprobacillus sp. CAG:605, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23828..24238
DNA (411bp) protein (137aa)
Transcriptional regulator TetR family n=1 Tax=Coprobacillus sp. CAG:605 RepID=R5W0I6_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CCZ89341.1}; TaxID=1262855 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:605.;"
L3_072_000M1_scaffold_610_21
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24316..25962
DNA (1647bp) protein (549aa)
Beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:914 RepID=R7M4Q0_9CLOT
Beta-lactamase domain protein {ECO:0000313|EMBL:CDE95346.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
beta-lactamase
L3_072_000M1_scaffold_610_22
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26015..26713
DNA (699bp) protein (233aa)
Dolichol-phosphate mannosyltransferase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAS3_9FIRM
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:CDF09212.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Glycosyltransferase Family 2 protein
L3_072_000M1_scaffold_610_23
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26833..27276
DNA (444bp) protein (148aa)
Protein MraZ n=1 Tax=Clostridium sp. CAG:914 RepID=R7M7G3_9CLOT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
mraZ; cell division protein MraZ
L3_072_000M1_scaffold_610_24
Firmicutes bacterium CAG:321, Firmicutes, Bacteria

Not on your lists

27266..28189
DNA (924bp) protein (308aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1263018 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:321.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Firmicutes bacterium CAG:321 RepID=R7HJP1_9FIRM
16S rRNA methyltransferase
L3_072_000M1_scaffold_610_25
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28195..28488
DNA (294bp) protein (98aa)
Cell division protein FtsL n=1 Tax=Clostridium sp. CAG:914 RepID=R7M5A2_9CLOT
Cell division protein FtsL {ECO:0000313|EMBL:CDE95835.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
cell division protein FtsL
L3_072_000M1_scaffold_610_26
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28497..30647
DNA (2151bp) protein (717aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase n=1 Tax=Clostridium sp. CAG:914 RepID=R7M625_9CLOT
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:CDE95836.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
L3_072_000M1_scaffold_610_27
unknown

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30727..31266
DNA (540bp) protein (180aa)

This feature has no annotations

L3_072_000M1_scaffold_610_28
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31300..31560
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:914 RepID=R7M594_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE95083.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
L3_072_000M1_scaffold_610_29
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31673..32380
DNA (708bp) protein (236aa)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Clostridium sp. CAG:914 RepID=R7M1Y9_9CLOT
Putative 3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CDE95084.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
3-oxoacyl-(acyl-carrier-protein) reductase
L3_072_000M1_scaffold_610_30
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32362..33609
DNA (1248bp) protein (416aa)
Aluminum resistance family protein n=1 Tax=Clostridium sp. CAG:914 RepID=R7M316_9CLOT
Aluminum resistance family protein {ECO:0000313|EMBL:CDE95085.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
aluminum resistance family protein
Displaying items 1-30 of 37 in total

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