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L3_072_000M1_scaffold_647

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_647_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..806
DNA (804bp) protein (268aa)
Transcriptional regulator n=4 Tax=Bacteroides RepID=A6L7R1_BACV8
transcriptional regulator
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS31637.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_072_000M1_scaffold_647_2
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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872..1636
DNA (765bp) protein (255aa)
TIGR02757 family protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NWH8_9BACE
TIGR02757 family protein {ECO:0000313|EMBL:CDF17739.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_072_000M1_scaffold_647_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1812..3800)
DNA (1989bp) protein (663aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase-like protein n=3 Tax=Bacteroides vulgatus RepID=D4V4L4_BACVU
L3_072_000M1_scaffold_647_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3804..4595)
DNA (792bp) protein (264aa)
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Glucosamine-6-phosphate deaminase n=7 Tax=Bacteroides RepID=NAGB_BACV8
L3_072_000M1_scaffold_647_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4641..5876)
DNA (1236bp) protein (412aa)
Major facilitator family transporter n=7 Tax=Bacteroides RepID=A6L7Q7_BACV8
major facilitator family transporter
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KDS56358.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_072_000M1_scaffold_647_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5895..7091)
DNA (1197bp) protein (399aa)
N-acylglucosamine 2-epimerase n=4 Tax=Bacteroides RepID=C6Z148_9BACE
renin-binding protein-related protein
N-acylglucosamine 2-epimerase family protein {ECO:0000313|EMBL:KDS56359.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_072_000M1_scaffold_647_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7104..8018)
DNA (915bp) protein (305aa)
Dihydrodipicolinate synthetase family n=10 Tax=Bacteroides RepID=C3PVP0_9BACE
N-acetylneuraminate lyase
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:KDS31643.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_072_000M1_scaffold_647_8
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8324..9529
DNA (1206bp) protein (402aa)
ROK family protein n=13 Tax=Bacteroides RepID=C3R7S4_9BACE
xylose repressor
ROK family protein {ECO:0000313|EMBL:EEO59388.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L3_072_000M1_scaffold_647_9
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9642..10277
DNA (636bp) protein (212aa)
RNA polymerase ECF-type sigma factor n=4 Tax=Bacteroides RepID=A6L7Q3_BACV8
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDF17732.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_072_000M1_scaffold_647_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10489..11571
DNA (1083bp) protein (361aa)
Sigma factor regulatory protein, FecR/PupR family n=4 Tax=Bacteroides RepID=D4V4M1_BACVU
anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:ABR41716.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_072_000M1_scaffold_647_11
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11719..15456
DNA (3738bp) protein (1246aa)
Putative outer membrane protein probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NYH3_9BACE
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:CDF17730.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_072_000M1_scaffold_647_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15472..17061
DNA (1590bp) protein (530aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4M3_BACVU
Putative outer membrane protein {ECO:0000313|EMBL:KDS31648.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_072_000M1_scaffold_647_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17074..18318
DNA (1245bp) protein (415aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L7P9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR41713.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_072_000M1_scaffold_647_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18431..19165)
DNA (735bp) protein (245aa)
HAD hydrolase, family IA, variant 3 n=2 Tax=Bacteroides vulgatus RepID=D4V4M5_BACVU
beta-phosphoglucomutase
Putative beta-phosphoglucomutase {ECO:0000313|EMBL:KDS31650.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_072_000M1_scaffold_647_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19315..20658)
DNA (1344bp) protein (448aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4M6_BACVU
L3_072_000M1_scaffold_647_16
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20672..21667)
DNA (996bp) protein (332aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU000439}; EC=1.1.1.94 {ECO:0000256|RuleBase:RU000439};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Glycerol-3-phosphate dehydrogenase n=7 Tax=Bacteroides RepID=A6L7P6_BACV8
glycerol-3-phosphate dehydrogenase
L3_072_000M1_scaffold_647_17
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21724..23454)
DNA (1731bp) protein (577aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=5 Tax=root RepID=C6Z154_9BACE
L3_072_000M1_scaffold_647_18
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23529..24137)
DNA (609bp) protein (203aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z155_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV66388.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
membrane protein
L3_072_000M1_scaffold_647_19
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24369..24911
DNA (543bp) protein (181aa)
Redoxin family protein n=4 Tax=Bacteroides RepID=C6Z156_9BACE
Redoxin family protein {ECO:0000313|EMBL:EET14615.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_072_000M1_scaffold_647_20
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24918..25724
DNA (807bp) protein (269aa)
N-acetylmuramoyl-L-alanine amidase n=8 Tax=root RepID=C6Z157_9BACE
N-acetylmuramoyl-L-alanine amidase
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDF17721.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_072_000M1_scaffold_647_21
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25896..27470)
DNA (1575bp) protein (525aa)
Ribonuclease G n=11 Tax=Bacteroides RepID=A6L7P1_BACV8
S1 RNA binding domain protein {ECO:0000313|EMBL:EEZ22304.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
ribonuclease G
L3_072_000M1_scaffold_647_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27709..27984)
DNA (276bp) protein (92aa)
DNA-binding protein HU n=15 Tax=Bacteroides RepID=A6L7P0_BACV8
DNA-binding protein HU
DNA-binding protein HU-beta {ECO:0000313|EMBL:EOS04241.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_072_000M1_scaffold_647_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28164..29222
DNA (1059bp) protein (353aa)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:KDS56377.1}; EC=3.2.2.- {ECO:0000313|EMBL:KDS56377.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
A/G-specific adenine glycosylase n=2 Tax=Bacteroides RepID=C6Z160_9BACE
A/G-specific adenine glycosylase
L3_072_000M1_scaffold_647_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29237..29704
DNA (468bp) protein (156aa)
Single-stranded DNA-binding protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9IT90_BACVU
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
single-strand binding protein
L3_072_000M1_scaffold_647_25
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29741..31093
DNA (1353bp) protein (451aa)
Gliding motility-associated protein GldE n=4 Tax=Bacteroides RepID=C6Z162_9BACE
Gliding motility-associated protein GldE {ECO:0000313|EMBL:EET14621.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hemolysin
L3_072_000M1_scaffold_647_26
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31102..31728
DNA (627bp) protein (209aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L7N6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66396.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_072_000M1_scaffold_647_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32199..33980)
DNA (1782bp) protein (594aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Two-component system sensor histidine kinase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L7N4_BACV8
two-component system sensor histidine kinase
L3_072_000M1_scaffold_647_28
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33999..34688)
DNA (690bp) protein (230aa)
Two-component system response regulator n=7 Tax=Bacteroides RepID=A6L7N3_BACV8
two-component system response regulator
Transcriptional regulatory protein ResD {ECO:0000313|EMBL:EET14624.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_072_000M1_scaffold_647_29
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34885..35928)
DNA (1044bp) protein (348aa)
L-asparaginase I n=10 Tax=Bacteroides RepID=A6L7N2_BACV8
1-alkyl-2-acetylglycerophosphocholine esterase
Putative uncharacterized protein {ECO:0000313|EMBL:EEB27051.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_072_000M1_scaffold_647_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36206..36982)
DNA (777bp) protein (259aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000255|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Tryptophan synthase alpha chain n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=TRPA_BACV8
Displaying items 1-30 of 57 in total

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