ggKbase home page

L3_072_000M1_scaffold_663

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_663_1
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..1674
DNA (1674bp) protein (558aa)
Extracellular solute-binding protein family 1 n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EWN5_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDE05872.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_072_000M1_scaffold_663_2
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2007..2207)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ETT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE05871.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_072_000M1_scaffold_663_3
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2292..2732)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ETB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE05870.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_072_000M1_scaffold_663_4
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3107..3724
DNA (618bp) protein (206aa)
Repressor LexA n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ESG2_9FIRM
Repressor LexA {ECO:0000313|EMBL:CDE05869.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
XRE family transcriptional regulator
L3_072_000M1_scaffold_663_5
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3753..5687
DNA (1935bp) protein (645aa)
ATPase component of ABC transporters with duplicated ATPase domain n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EUE7_9FIRM
ATPase component of ABC transporters with duplicated ATPase domain {ECO:0000313|EMBL:CDE05868.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
ABC transporter
L3_072_000M1_scaffold_663_6
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5922..7286
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EWM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE05867.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
putative efflux protein, MATE family
L3_072_000M1_scaffold_663_7
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

8050..9213
DNA (1164bp) protein (388aa)
Rubredoxin n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TY49_9FIRM
Rubredoxin {ECO:0000313|EMBL:CDC77060.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
Uncharacterized flavoproteins
L3_072_000M1_scaffold_663_8
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9357..9764
DNA (408bp) protein (136aa)
Transcriptional regulator Fur family n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EPE7_9FIRM
Transcriptional regulator Fur family {ECO:0000313|EMBL:CDE04158.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
ferric uptake regulator family protein
L3_072_000M1_scaffold_663_9
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9764..10546
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ENC1_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
conserved hypothetical protein TIGR00726
L3_072_000M1_scaffold_663_10
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10635..11189
DNA (555bp) protein (185aa)
rbr3A; Reverse rubrerythrin-1 (EC:1.11.1.1)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ERP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04162.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_072_000M1_scaffold_663_11
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11266..11619
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EMP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04164.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_072_000M1_scaffold_663_12
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11913..12065)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ENZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04166.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_072_000M1_scaffold_663_13
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12259..14313
DNA (2055bp) protein (685aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 PF9_9FIRM">RepID=R7EPF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04168.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_072_000M1_scaffold_663_14
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14363..16129
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7END2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04170.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L3_072_000M1_scaffold_663_15
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16398..16835
DNA (438bp) protein (146aa)
Heat shock protein Hsp20 n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ERQ8_9FIRM
Heat shock protein Hsp20 {ECO:0000313|EMBL:CDE04172.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hsp20; Heat shock protein Hsp20
L3_072_000M1_scaffold_663_16
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17076..17744
DNA (669bp) protein (223aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
rpe_2; ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EMQ1_9FIRM
L3_072_000M1_scaffold_663_17
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17778..18314
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7END7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04175.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_072_000M1_scaffold_663_18
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18363..19199)
DNA (837bp) protein (279aa)
Ketose-bisphosphate aldolase n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ENE7_9FIRM
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:CDE04185.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
fructose-bisphosphate aldolase
L3_072_000M1_scaffold_663_19
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19220..20635)
DNA (1416bp) protein (472aa)
MatE efflux family protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ERS5_9FIRM
MatE efflux family protein {ECO:0000313|EMBL:CDE04187.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
MatE efflux family protein
L3_072_000M1_scaffold_663_20
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20760..22469)
DNA (1710bp) protein (570aa)
Glycosyl hydrolase family 2 sugar binding domain protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EPI4_9FIRM
Glycosyl hydrolase family 2 sugar binding domain protein {ECO:0000313|EMBL:CDE04188.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
glycoside hydrolase family 2 sugar binding
L3_072_000M1_scaffold_663_21
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22462..23622)
DNA (1161bp) protein (387aa)
Na+/melibiose symporter-like transporter n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EMR6_9FIRM
Na+/melibiose symporter-like transporter {ECO:0000313|EMBL:CDE04189.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
Na+/melibiose symporter-like transporter
L3_072_000M1_scaffold_663_22
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23918..24634)
DNA (717bp) protein (239aa)
High affinity branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ENF4_9FIRM
High affinity branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE04190.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
branched-chain amino acid ABC transporter ATP-binding protein
L3_072_000M1_scaffold_663_23
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24627..25469)
DNA (843bp) protein (281aa)
ABC-type branched-chain amino acid transport system ATPase component n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EP22_9FIRM
ABC-type branched-chain amino acid transport system ATPase component {ECO:0000313|EMBL:CDE04191.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
branched-chain amino acid ABC transporter ATPase
L3_072_000M1_scaffold_663_24
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25466..26620)
DNA (1155bp) protein (385aa)
ABC-type branched-chain amino acid transport system permease component n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ERT0_9FIRM
ABC-type branched-chain amino acid transport system permease component {ECO:0000313|EMBL:CDE04192.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
ABC transporter inner membrane protein
L3_072_000M1_scaffold_663_25
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26635..27513)
DNA (879bp) protein (293aa)
Putative high-affinity branched-chain amino acid ABC transporter permease protein LivH n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EPJ0_9FIRM
Putative high-affinity branched-chain amino acid ABC transporter permease protein LivH {ECO:0000313|EMBL:CDE04193.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
branched-chain amino acid ABC transporter permease protein
L3_072_000M1_scaffold_663_26
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27704..28870)
DNA (1167bp) protein (389aa)
Extracellular ligand-binding receptor n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ENG0_9FIRM
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDE04195.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
branched-chain amino acid ABC transporter branched-chain amino acid-binding protein
L3_072_000M1_scaffold_663_27
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29089..30846)
DNA (1758bp) protein (586aa)
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EP26_9FIRM
Beta-galactosidase {ECO:0000313|EMBL:CDE04196.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_072_000M1_scaffold_663_28
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30886..32106)
DNA (1221bp) protein (407aa)
Putative methyltransferase n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EPJ6_9FIRM
Putative methyltransferase {ECO:0000313|EMBL:CDE04198.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
conserved hypothetical protein
L3_072_000M1_scaffold_663_29
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32283..33914
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ENG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04200.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
L3_072_000M1_scaffold_663_30
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34853..35641)
DNA (789bp) protein (263aa)
putative glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphoryl diester phosphodiesterase putative n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EW55_9FIRM
Glycerophosphoryl diester phosphodiesterase putative {ECO:0000313|EMBL:CDE05707.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
Displaying items 1-30 of 41 in total

View Taxonomy