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L3_072_000M1_scaffold_686

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_686_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(190..1740)
DNA (1551bp) protein (517aa)
Recombinase family protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TFY1_9FIRM
Resolvase protein {ECO:0000313|EMBL:ERK52288.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
recombinase
L3_072_000M1_scaffold_686_2
unknown

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1855..2004
DNA (150bp) protein (50aa)

This feature has no annotations

L3_072_000M1_scaffold_686_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1948..2334)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0AZX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ57675.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
transcriptional repressor
L3_072_000M1_scaffold_686_4
unknown

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2479..2706
DNA (228bp) protein (76aa)

This feature has no annotations

L3_072_000M1_scaffold_686_5
Streptococcus salivarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2733..2951
DNA (219bp) protein (73aa)
Prophage pi2 protein 05 n=1 Tax=Streptococcus salivarius (strain JIM8777) RepID=F8LPG1_STRE8
repressor
Repressor {ECO:0000313|EMBL:AIY20801.1}; TaxID=1304 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus salivarius.;"
L3_072_000M1_scaffold_686_6
unknown

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2976..3167
DNA (192bp) protein (64aa)

This feature has no annotations

L3_072_000M1_scaffold_686_7
unknown

Not on your lists

3160..3507
DNA (348bp) protein (116aa)

This feature has no annotations

L3_072_000M1_scaffold_686_8
unknown

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3510..3695
DNA (186bp) protein (62aa)

This feature has no annotations

L3_072_000M1_scaffold_686_9
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

3692..4009
DNA (318bp) protein (106aa)
Gp57 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AT00_9FIRM
Gp57 {ECO:0000313|EMBL:CCX46083.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative uncharacterized protein
L3_072_000M1_scaffold_686_10
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4078..5238
DNA (1161bp) protein (387aa)
Putative uncharacterized protein id=4072778 bin=GWF2_Clostridiales_38_85 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Uncharacterized protein {ECO:0000313|EMBL:EFE46502.2}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
hypothetical protein
L3_072_000M1_scaffold_686_11
unknown

Not on your lists

5253..5720
DNA (468bp) protein (156aa)

This feature has no annotations

L3_072_000M1_scaffold_686_12
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5748..6311
DNA (564bp) protein (188aa)
Conserved phage-associated protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PSY0_9FIRM
Conserved phage-associated protein {ECO:0000313|EMBL:CDC21601.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
hypothetical protein
L3_072_000M1_scaffold_686_13
Selenomonas artemidis, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6298..8250
DNA (1953bp) protein (651aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=749551 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas artemidis F0399.;"
DNA polymerase n=1 Tax=Selenomonas artemidis F0399 RepID=E7N418_9FIRM
DNA-directed DNA polymerase
L3_072_000M1_scaffold_686_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8256..9269
DNA (1014bp) protein (338aa)
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:KJZ87931.1}; EC=3.4.17.13 {ECO:0000313|EMBL:KJZ87931.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y4S0_9FIRM
putative phosphoadenosine phosphosulfate reductase family
L3_072_000M1_scaffold_686_15
unknown

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9275..9433
DNA (159bp) protein (53aa)

This feature has no annotations

L3_072_000M1_scaffold_686_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9430..9981
DNA (552bp) protein (184aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RV27_9FIRM
L3_072_000M1_scaffold_686_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9978..10160
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EI62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57897.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
phage DNA methylase
L3_072_000M1_scaffold_686_18
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10179..12545
DNA (2367bp) protein (789aa)
virulence-associated protein E n=1 Tax=Bacillus sp. L1(2012) RepID=UPI00034B8F6E
Bacillus subtilis strain HM-66 Contig17, whole genome shotgun sequence {ECO:0000313|EMBL:KIU13137.1}; TaxID=1423 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis.;"
hypothetical protein
L3_072_000M1_scaffold_686_19
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12542..12832
DNA (291bp) protein (97aa)
VRR-NUC domain protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWG4_9FIRM
VRR-NUC domain-containing protein {ECO:0000313|EMBL:ETK30012.1}; TaxID=697286 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus larvae subsp. larvae DSM 25719.;"
VRR-NUC domain-containing protein
L3_072_000M1_scaffold_686_20
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

12879..13595
DNA (717bp) protein (239aa)
DNA modification methylase (EC:2.1.1.72)
Putative uncharacterized protein id=3182703 bin=GWF2_Clostridiales_36_10 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
L3_072_000M1_scaffold_686_21
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

13592..14971
DNA (1380bp) protein (460aa)
SNF2-related protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LTU1_TEPAE
SNF2-like protein
SNF2-related protein {ECO:0000313|EMBL:CCP27487.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
L3_072_000M1_scaffold_686_22
unknown

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14968..15084
DNA (117bp) protein (39aa)

This feature has no annotations

L3_072_000M1_scaffold_686_23
unknown

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15081..15401
DNA (321bp) protein (107aa)

This feature has no annotations

L3_072_000M1_scaffold_686_24
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15395..15826
DNA (432bp) protein (144aa)
Sigma-70 region 4 domain protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WQ64_9FIRM
Sigma-70 region 4 domain protein {ECO:0000313|EMBL:CDD11495.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
hypothetical protein
L3_072_000M1_scaffold_686_25
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15816..16355
DNA (540bp) protein (180aa)
Thymidylate synthase ThyX n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EVG2_9FIRM
Thymidylate synthase ThyX {ECO:0000313|EMBL:CDE06610.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_072_000M1_scaffold_686_26
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(16394..16807)
DNA (414bp) protein (138aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HRH2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCY27422.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
helix-turn-helix domain-containing protein
L3_072_000M1_scaffold_686_27
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17178..17642
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Lactobacillus johnsonii ATCC 33200 RepID=C2E712_LACJH
Uncharacterized protein {ECO:0000313|EMBL:EEJ59380.1}; TaxID=525330 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii ATCC 33200.;"
Lj928 prophage protein
L3_072_000M1_scaffold_686_28
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(17675..17890)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40151.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
XRE family transcriptional regulator
L3_072_000M1_scaffold_686_29
Anaerovibrio lipolyticus, Anaerovibrio, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18308..18520
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KHM52810.1}; TaxID=82374 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaerovibrio.;" source="Anaerovibrio lipolyticus.;"
L3_072_000M1_scaffold_686_30
unknown

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18569..18784
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying items 1-30 of 51 in total

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