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L3_072_000M1_scaffold_693

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_693_1
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..909)
DNA (909bp) protein (303aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3XQG8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHG99838.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L3_072_000M1_scaffold_693_2
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1404..2900
DNA (1497bp) protein (499aa)
N-6 DNA Methylase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NI22_9BACT
N-6 DNA Methylase {ECO:0000313|EMBL:CCZ01749.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
type I restriction-modification system subunit M
L3_072_000M1_scaffold_693_3
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2905..4026
DNA (1122bp) protein (374aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NC54_9BACT
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:CCZ01750.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
type I restriction enzyme StySPI specificity protein
L3_072_000M1_scaffold_693_4
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4041..4199
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NWH5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ01751.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L3_072_000M1_scaffold_693_5
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4207..4545
DNA (339bp) protein (113aa)
Helicase protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NY24_9BACT
Helicase protein {ECO:0000313|EMBL:CCZ01752.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
type I restriction-modification system, R subunit
L3_072_000M1_scaffold_693_6
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4572..7556
DNA (2985bp) protein (995aa)
Helicase protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NY24_9BACT
Helicase protein {ECO:0000313|EMBL:CCZ01752.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
type I restriction-modification system, R subunit
L3_072_000M1_scaffold_693_7
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7766..8155)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NDD7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ01753.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_693_8
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8283..9215
DNA (933bp) protein (311aa)
Transcription antitermination factor NusB n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NI26_9BACT
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
nitrogen utilization protein
L3_072_000M1_scaffold_693_9
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9228..9545
DNA (318bp) protein (106aa)
Preprotein translocase, YajC subunit n=3 Tax=Bacteroidetes RepID=F3XQK0_9FLAO
Preprotein translocase YajC subunit {ECO:0000313|EMBL:CCZ01755.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
preprotein translocase subunit YajC
L3_072_000M1_scaffold_693_10
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9551..10555
DNA (1005bp) protein (335aa)
YbbR-like protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NWH8_9BACT
YbbR-like protein {ECO:0000313|EMBL:CCZ01756.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_693_11
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10557..11156
DNA (600bp) protein (200aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase 1 n=2 Tax=Bacteroidetes RepID=F3XQK2_9FLAO
L3_072_000M1_scaffold_693_12
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11242..11688
DNA (447bp) protein (149aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3XQK3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CCZ01758.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_693_13
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11645..11815)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NI30_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ01759.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L3_072_000M1_scaffold_693_14
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11893..12486
DNA (594bp) protein (198aa)
Sigma-70 region 2 n=3 Tax=Bacteroidetes RepID=F3XQK4_9FLAO
Sigma-70 region 2 {ECO:0000313|EMBL:EHG99874.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
RNA polymerase ECF-type sigma factor
L3_072_000M1_scaffold_693_15
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12561..12692
DNA (132bp) protein (44aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3QRT3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ01761.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L3_072_000M1_scaffold_693_16
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12781..13431
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
Ribulose-phosphate 3-epimerase n=2 Tax=Bacteroidetes RepID=F3XQK6_9FLAO
ribulose-phosphate 3-epimerase
L3_072_000M1_scaffold_693_17
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13477..15594
DNA (2118bp) protein (706aa)
ComEC/Rec2-like protein n=1 Tax=Capnocytophaga sp. oral taxon 329 str. F0087 RepID=F3XQK7_9FLAO
ComEC/Rec2-like protein {ECO:0000313|EMBL:CCZ01763.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
putative competence related membrane protein
L3_072_000M1_scaffold_693_18
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15653..16690
DNA (1038bp) protein (346aa)
DHH family protein n=2 Tax=Bacteroidetes RepID=F3XQK8_9FLAO
DHH family protein {ECO:0000313|EMBL:EHG99877.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
phosphoesterase RecJ domain-containing protein
L3_072_000M1_scaffold_693_19
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16715..17413
DNA (699bp) protein (233aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3XQK9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CCZ01765.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
putative lipoprotein
L3_072_000M1_scaffold_693_20
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17414..18448)
DNA (1035bp) protein (345aa)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NWI8_9BACT
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CCZ01766.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
coproporphyrinogen III oxidase
L3_072_000M1_scaffold_693_21
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18775..20934
DNA (2160bp) protein (720aa)
Putative translation elongation factor G n=3 Tax=Bacteroidetes RepID=F3XQL1_9FLAO
Putative translation elongation factor G {ECO:0000313|EMBL:CCZ01767.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
fusA; elongation factor G
L3_072_000M1_scaffold_693_22
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21246..22799
DNA (1554bp) protein (518aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Bacteroidetes RepID=F3XQL2_9FLAO
rprX; sensor histidine kinase RprX
L3_072_000M1_scaffold_693_23
Paraprevotella xylaniphila, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22805..23509
DNA (705bp) protein (235aa)
Transcriptional regulatory protein RprY n=4 Tax=Bacteroidetes RepID=F3QRS5_9BACT
Transcriptional regulatory protein RprY {ECO:0000313|EMBL:EGG55845.1}; TaxID=762982 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;"
two component transcriptional regulator, winged helix family
L3_072_000M1_scaffold_693_24
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23579..23857)
DNA (279bp) protein (93aa)
Conserved domain protein n=3 Tax=Bacteroidetes RepID=F3XQL4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CCZ01771.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_693_25
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23859..24332)
DNA (474bp) protein (158aa)
Transcriptional regulator, MarR family n=3 Tax=Bacteroidetes RepID=F3XQL5_9FLAO
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EHG99884.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
putative MarR-family regulatory protein
L3_072_000M1_scaffold_693_26
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


24532..24873
DNA (342bp) protein (114aa)
30S ribosomal protein S6 n=4 Tax=Bacteroidetes RepID=F3QRS2_9BACT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
30S ribosomal protein S6
L3_072_000M1_scaffold_693_27
Paraprevotella xylaniphila, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


24877..25143
DNA (267bp) protein (89aa)
30S ribosomal protein S18 n=4 Tax=Bacteroidetes RepID=F3QRS1_9BACT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=762982 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;"
rpsR; 30S ribosomal protein S18
L3_072_000M1_scaffold_693_28
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


25162..25608
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=3 Tax=Bacteroidetes RepID=F3XQL8_9FLAO
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
rplI; 50S ribosomal protein L9
L3_072_000M1_scaffold_693_29
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25798..26013)
DNA (216bp) protein (72aa)
Uncharacterized protein n=4 Tax=Bacteroidetes RepID=F3QRR9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ01776.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_693_30
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26264..27607
DNA (1344bp) protein (448aa)
tRNA methylthiotransferase YqeV n=2 Tax=Bacteroidetes RepID=F3XQM0_9FLAO
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:EHG99889.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
MiaB-like tRNA modifying enzyme
Displaying items 1-30 of 38 in total

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