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L3_072_000M1_scaffold_711

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_711_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(283..507)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AGW4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85581.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_072_000M1_scaffold_711_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(656..979)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AIM9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14610.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
sulfatase
L3_072_000M1_scaffold_711_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1280..1969
DNA (690bp) protein (230aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=2 Tax=Parabacteroides merdae RepID=K6BFM8_9PORP
L3_072_000M1_scaffold_711_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1966..4956
DNA (2991bp) protein (997aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=2 Tax=Parabacteroides merdae RepID=K6BFM8_9PORP
L3_072_000M1_scaffold_711_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5048..5650
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y8A2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14612.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_711_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5837..7738
DNA (1902bp) protein (634aa)
Glycosyl hydrolase family 20 catalytic domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTG4_9PORP
Glycosyl hydrolase family 20 catalytic domain protein {ECO:0000313|EMBL:CDD14613.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
beta-N-acetylhexosaminidase
L3_072_000M1_scaffold_711_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7823..9118
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X652_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14614.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_711_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9200..10018
DNA (819bp) protein (273aa)
Phosphate binding protein n=3 Tax=Parabacteroides merdae RepID=A7AIN7_9PORP
Phosphate binding protein {ECO:0000313|EMBL:EDN85254.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
phosphate ABC transporter substrate-binding protein
L3_072_000M1_scaffold_711_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10020..10148)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BFN5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85255.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_072_000M1_scaffold_711_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10247..11335
DNA (1089bp) protein (363aa)
Oxidoreductase 2-nitropropane dioxygenase family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XBC5_9PORP
Oxidoreductase 2-nitropropane dioxygenase family protein {ECO:0000313|EMBL:CDD13646.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_711_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11462..11875)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6A653_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13647.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_711_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12026..12583
DNA (558bp) protein (186aa)
RNA polymerase sigma factor n=4 Tax=Parabacteroides RepID=A7AIP1_9PORP
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RNA polymerase ECF-type sigma factor
L3_072_000M1_scaffold_711_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12585..12944
DNA (360bp) protein (120aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIP2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85259.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_711_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


13097..14890
DNA (1794bp) protein (598aa)
30S ribosomal protein S1 n=2 Tax=Parabacteroides RepID=A7AIP3_9PORP
Putative ribosomal protein S1 {ECO:0000313|EMBL:EDN85260.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
rpsA; 30S ribosomal protein S1
L3_072_000M1_scaffold_711_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14978..15241)
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIP4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85261.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_711_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15506..15919
DNA (414bp) protein (138aa)
Response regulator receiver domain protein n=2 Tax=Parabacteroides RepID=R6XZH9_9PORP
Response regulator receiver domain protein {ECO:0000313|EMBL:CDD11617.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
two-component system response regulator
L3_072_000M1_scaffold_711_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16223..16498
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6B344_9PORP
DNA-binding protein HU {ECO:0000313|EMBL:CDD11610.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
histone-like protein
L3_072_000M1_scaffold_711_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16668..17732)
DNA (1065bp) protein (355aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
3-dehydroquinate synthase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WKD6_9PORP
3-dehydroquinate synthase
L3_072_000M1_scaffold_711_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(17903..20530)
DNA (2628bp) protein (876aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=2 Tax=Parabacteroides merdae RepID=A7AIQ1_9PORP
L3_072_000M1_scaffold_711_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20628..21611
DNA (984bp) protein (328aa)
Peptidase, M23 family n=3 Tax=Parabacteroides RepID=A7AIQ2_9PORP
Peptidase, M23 family {ECO:0000313|EMBL:EDN85269.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
peptidase
L3_072_000M1_scaffold_711_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21627..21983
DNA (357bp) protein (119aa)
Transcriptional regulator, MerR family n=6 Tax=Parabacteroides RepID=A7AIQ3_9PORP
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDN85270.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L3_072_000M1_scaffold_711_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22071..22466
DNA (396bp) protein (132aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AIQ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13875.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_072_000M1_scaffold_711_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22561..24819)
DNA (2259bp) protein (753aa)
RelA/SpoT family protein n=2 Tax=Parabacteroides RepID=K5ZQT4_9PORP
RelA/SpoT family protein {ECO:0000313|EMBL:CDD14341.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
L3_072_000M1_scaffold_711_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24941..26491)
DNA (1551bp) protein (517aa)
LysM domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYE3_9PORP
LysM domain protein {ECO:0000313|EMBL:CDD14340.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoside hydrolase
L3_072_000M1_scaffold_711_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26496..27254)
DNA (759bp) protein (253aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIQ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14339.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_711_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27251..28138)
DNA (888bp) protein (296aa)
ParB-like protein n=3 Tax=Parabacteroides merdae RepID=A7AIQ8_9PORP
ParB-like partition protein {ECO:0000313|EMBL:EKN13879.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
chromosome partitioning protein ParB
L3_072_000M1_scaffold_711_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28218..28982)
DNA (765bp) protein (255aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=3 Tax=Parabacteroides merdae RepID=A7AIQ9_9PORP
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EDN85276.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ParaA family ATPase
L3_072_000M1_scaffold_711_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29172..29480)
DNA (309bp) protein (103aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIR0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14517.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative toxin-antitoxin system toxin component, PIN family
L3_072_000M1_scaffold_711_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30174..33359
DNA (3186bp) protein (1062aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AIR2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85279.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_711_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33712..34056
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YJJ0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13882.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Displaying items 1-30 of 37 in total

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