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L3_072_000M1_scaffold_741

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_741_1
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..309)
DNA (309bp) protein (103aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Methionyl-tRNA formyltransferase n=2 Tax=Bacteroidetes RepID=F3XXX5_9FLAO
methionyl-tRNA formyltransferase
L3_072_000M1_scaffold_741_2
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(321..2120)
DNA (1800bp) protein (600aa)
Chloride transporter, ClC family n=2 Tax=Bacteroidetes RepID=F3XXX6_9FLAO
Chloride transporter, ClC family {ECO:0000313|EMBL:EHH00702.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
chloride channel protein
L3_072_000M1_scaffold_741_3
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2133..2702)
DNA (570bp) protein (190aa)
Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Bacteroidetes RepID=F3XXX7_9FLAO
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EHH00703.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
Sua5/YciO/YrdC/YwlC family protein
L3_072_000M1_scaffold_741_4
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2725..4290)
DNA (1566bp) protein (522aa)
Peptide chain release factor 3 n=2 Tax=Bacteroidetes RepID=F3XXX8_9FLAO
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
prfC; peptide chain release factor 3
L3_072_000M1_scaffold_741_5
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4309..5169)
DNA (861bp) protein (287aa)
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NTE0_9BACT
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CCZ00631.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L3_072_000M1_scaffold_741_6
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5189..5734)
DNA (546bp) protein (182aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3XXY0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CCZ00630.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_741_7
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5739..6395)
DNA (657bp) protein (219aa)
Translocator protein, LysE family n=3 Tax=Bacteroidetes RepID=F3XXY1_9FLAO
Translocator protein LysE family {ECO:0000313|EMBL:CCZ00629.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
LysE-like exporter
L3_072_000M1_scaffold_741_8
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6547..7515
DNA (969bp) protein (323aa)
glucokinase (EC:2.7.1.2)
Putative glucokinase n=2 Tax=Bacteroidetes RepID=F3XXY2_9FLAO
Putative glucokinase {ECO:0000313|EMBL:EHH00708.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
L3_072_000M1_scaffold_741_9
unknown

Not on your lists

7538..7909
DNA (372bp) protein (124aa)

This feature has no annotations

L3_072_000M1_scaffold_741_10
Paraprevotella xylaniphila, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7906..9003
DNA (1098bp) protein (366aa)
Conserved domain protein n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QRG0_9BACT
Conserved domain protein {ECO:0000313|EMBL:EGG56090.1}; TaxID=762982 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;"
L3_072_000M1_scaffold_741_11
unknown

Not on your lists

comp(8909..9115)
DNA (207bp) protein (69aa)

This feature has no annotations

L3_072_000M1_scaffold_741_12
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9153..9344)
DNA (192bp) protein (64aa)
Conserved domain protein n=3 Tax=Bacteroidetes RepID=F3XXY3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CCZ01719.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_741_13
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9331..9939)
DNA (609bp) protein (203aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3XXY4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHH00710.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L3_072_000M1_scaffold_741_14
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10043..10726)
DNA (684bp) protein (228aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=2 Tax=Bacteroidetes RepID=F3XXY5_9FLAO
L3_072_000M1_scaffold_741_15
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10916..11242
DNA (327bp) protein (109aa)
Transcriptional regulator BlaI/MecI/CopY family n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NWF1_9BACT
Transcriptional regulator BlaI/MecI/CopY family {ECO:0000313|EMBL:CCZ01716.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
putative transcriptional regulator
L3_072_000M1_scaffold_741_16
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11197..12825
DNA (1629bp) protein (543aa)
Peptidase M56 family n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NC25_9BACT
Peptidase M56 family {ECO:0000313|EMBL:CCZ01715.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_741_17
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12932..14179)
DNA (1248bp) protein (416aa)
Flavoprotein family protein n=2 Tax=Bacteroidetes RepID=F3XXY9_9FLAO
Flavoprotein family protein {ECO:0000313|EMBL:EHH00715.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
flavoprotein family protein
L3_072_000M1_scaffold_741_18
unknown

Not on your lists

14235..14384
DNA (150bp) protein (50aa)

This feature has no annotations

L3_072_000M1_scaffold_741_19
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14926..16938
DNA (2013bp) protein (671aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
ligA; DNA ligase (NAD(+)) (EC:6.5.1.2)
DNA ligase n=2 Tax=Bacteroidetes RepID=F3XXZ2_9FLAO
L3_072_000M1_scaffold_741_20
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17005..17898
DNA (894bp) protein (298aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=3 Tax=Bacteroidetes RepID=F3XXZ3_9FLAO
L3_072_000M1_scaffold_741_21
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18018..20891
DNA (2874bp) protein (958aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NC20_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ01710.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_741_22
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21029..21574
DNA (546bp) protein (182aa)
Antioxidant AhpC/TSA family n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NHY9_9BACT
Antioxidant AhpC/TSA family {ECO:0000313|EMBL:CCZ01709.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
thiol-disulfide isomerase
L3_072_000M1_scaffold_741_23
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21585..22535
DNA (951bp) protein (317aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NDA0_9BACT
L3_072_000M1_scaffold_741_24
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22658..24124)
DNA (1467bp) protein (489aa)
MFS transporter SP family n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NXX5_9BACT
MFS transporter SP family {ECO:0000313|EMBL:CCZ01707.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
D-xylose-proton symporter
L3_072_000M1_scaffold_741_25
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24146..24925)
DNA (780bp) protein (260aa)
Hydrolase NUDIX family n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NWE2_9BACT
Hydrolase NUDIX family {ECO:0000313|EMBL:CCZ01706.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
DNA mismatch repair protein MutT
L3_072_000M1_scaffold_741_26
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25269..25805
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NC18_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ01705.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L3_072_000M1_scaffold_741_27
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25662..27053)
DNA (1392bp) protein (464aa)
Tetratricopeptide repeat protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NHY4_9BACT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CCZ01704.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_741_28
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27300..28493
DNA (1194bp) protein (398aa)
Threonine ammonia-lyase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5ND95_9BACT
Threonine ammonia-lyase {ECO:0000313|EMBL:CCZ01703.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
threonine dehydratase
L3_072_000M1_scaffold_741_29
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28509..28883
DNA (375bp) protein (125aa)
Putative endoribonuclease L-PSP n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NXX0_9BACT
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:CCZ01702.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
putative endoribonuclease L-PSP
L3_072_000M1_scaffold_741_30
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28915..29115)
DNA (201bp) protein (67aa)
Conserved domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NWD7_9BACT
Conserved domain protein {ECO:0000313|EMBL:CCZ01701.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Displaying items 1-30 of 47 in total

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