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L3_072_000M1_scaffold_780

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_780_1
Clostridium sp. CAG:609, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..413
DNA (411bp) protein (137aa)
Protein translocase subunit SecA n=1 Tax=Clostridium sp. CAG:609 RepID=R7P486_9CLOT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1262827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:609.;"
Preprotein translocase subunit SecA
L3_072_000M1_scaffold_780_2
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

640..1959
DNA (1320bp) protein (440aa)
Prophage lambdaba04 site-specific recombinase phage integrase family n=1 Tax=Clostridium sp. CAG:914 RepID=R7M659_9CLOT
Prophage lambdaba04 site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDE95398.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
prophage lambdaba04 site-specific recombinase phage integrase family
L3_072_000M1_scaffold_780_3
Clostridium sp. CAG:417, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2038..2856
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:417 RepID=R6SKF7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC61693.1}; TaxID=1262804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:417.;"
hypothetical protein
L3_072_000M1_scaffold_780_4
unknown

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comp(2874..3296)
DNA (423bp) protein (141aa)

This feature has no annotations

L3_072_000M1_scaffold_780_5
unknown

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3583..3768
DNA (186bp) protein (62aa)

This feature has no annotations

L3_072_000M1_scaffold_780_6
unknown

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3746..4045
DNA (300bp) protein (100aa)

This feature has no annotations

L3_072_000M1_scaffold_780_7
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4327..4509
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6UZ55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85381.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_072_000M1_scaffold_780_8
Firmicutes bacterium CAG:536, Firmicutes, Bacteria

Not on your lists

4528..4812
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium M10-2 RepID=R9LXK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA34454.1}; TaxID=1263028 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:536.;"
L3_072_000M1_scaffold_780_9
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

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4809..5159
DNA (351bp) protein (117aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
mRNA interferase n=2 Tax=unclassified Eubacteriaceae RepID=J6HEW1_9FIRM
ndoA; endoribonuclease toxin
L3_072_000M1_scaffold_780_10
unknown

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5177..5728
DNA (552bp) protein (184aa)

This feature has no annotations

L3_072_000M1_scaffold_780_11
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

5713..5856
DNA (144bp) protein (48aa)
UPI000344E997 related cluster n=1 Tax=unknown RepID=UPI000344E997
cold-shock DNA-binding domain-containing protein
Strain A contig00018, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ55107.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber.;"
L3_072_000M1_scaffold_780_12
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5943..6404
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VUN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY84011.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_072_000M1_scaffold_780_13
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6467..7471
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R8A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP12150.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
L3_072_000M1_scaffold_780_14
unknown

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comp(7492..8208)
DNA (717bp) protein (239aa)

This feature has no annotations

L3_072_000M1_scaffold_780_15
Clostridium sp. CAG:1193, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8216..8752)
DNA (537bp) protein (179aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:1193 RepID=R5ISQ8_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCY45288.1}; TaxID=1262771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1193.;"
L3_072_000M1_scaffold_780_16
unknown

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comp(8736..9179)
DNA (444bp) protein (148aa)

This feature has no annotations

L3_072_000M1_scaffold_780_17
unknown

Not on your lists

comp(9164..9544)
DNA (381bp) protein (127aa)

This feature has no annotations

L3_072_000M1_scaffold_780_18
Clostridium sp. CAG:921, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9785..10036
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R5LDK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY71032.1}; TaxID=1262847 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:921.;"
L3_072_000M1_scaffold_780_19
unknown

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10287..10547
DNA (261bp) protein (87aa)

This feature has no annotations

L3_072_000M1_scaffold_780_20
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10720..11019
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R5KW39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54736.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L3_072_000M1_scaffold_780_21
Firmicutes bacterium CAG:321, Firmicutes, Bacteria

Not on your lists

11359..12267
DNA (909bp) protein (303aa)
Transcriptional regulator LysR family n=1 Tax=Firmicutes bacterium CAG:321 RepID=R7HHB4_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDE39034.1}; TaxID=1263018 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:321.;"
cbbR; HTH-type transcriptional regulator CbbR
L3_072_000M1_scaffold_780_22
Gilliamella apicola, Gilliamella, Orbales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12367..13254
DNA (888bp) protein (296aa)
PHP domain protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MF29_9CLOT
putative metal-dependent phosphoesterases (PHP family)
Putative metal-dependent phosphoesterases (PHP family) {ECO:0000313|EMBL:AHN25546.1}; TaxID=1196095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Orbales; Orbaceae; Gilliamella.;" source="Gilliamella apicola.;"
L3_072_000M1_scaffold_780_23
unknown

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13257..13826
DNA (570bp) protein (190aa)

This feature has no annotations

L3_072_000M1_scaffold_780_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13831..14310
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum CFSAN001627 RepID=M1ZPG9_CLOBO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN40411.1}; TaxID=1232189 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CFSAN001627.;"
L3_072_000M1_scaffold_780_25
Xenorhabdus cabanillasii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14314..15339
DNA (1026bp) protein (342aa)
Radical SAM domain protein n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T6T6_THEIA
Uncharacterized protein {ECO:0000313|EMBL:CDL79648.1}; TaxID=1427517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus cabanillasii JM26.;"
radical SAM protein
L3_072_000M1_scaffold_780_26
unknown

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15336..16472
DNA (1137bp) protein (379aa)

This feature has no annotations

L3_072_000M1_scaffold_780_27

Not on your lists

16469..17656
DNA (1188bp) protein (396aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQK6_ROSCS
Marine sediment metagenome DNA, contig: S01H4_C03841 {ECO:0000313|EMBL:GAG62328.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
L3_072_000M1_scaffold_780_28
Xenorhabdus szentirmaii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17646..18485
DNA (840bp) protein (280aa)
Uncharacterized protein {ECO:0000313|EMBL:CDL81702.1}; TaxID=1427518 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus szentirmaii DSM 16338.;"
protein of unknown function
L3_072_000M1_scaffold_780_29

Not on your lists

18490..19449
DNA (960bp) protein (320aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS52117.1}; TaxID=1618822 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_28.;"
L3_072_000M1_scaffold_780_30
unknown

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19461..20186
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Staphylococcus vitulinus RepID=UPI0002DF38E0
Displaying items 1-30 of 79 in total

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