ggKbase home page

L3_072_000M1_scaffold_847

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_847_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..995)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0B9R2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61140.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
CHAP domain.
L3_072_000M1_scaffold_847_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1010..1504)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CUV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61139.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_072_000M1_scaffold_847_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1522..2289)
DNA (768bp) protein (256aa)
SrtB family sortase n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CJL1_9CLOT
SrtB family sortase {ECO:0000313|EMBL:ENZ61138.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
sortase, SrtB family
L3_072_000M1_scaffold_847_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2302..2703)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CWL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61137.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_072_000M1_scaffold_847_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2717..5050)
DNA (2334bp) protein (778aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0B9J9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61136.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Domain of unknown function DUF87.
L3_072_000M1_scaffold_847_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5043..5408)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0B9Q8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61135.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_072_000M1_scaffold_847_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5477..6190)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CUV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61134.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_072_000M1_scaffold_847_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6335..7171)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CJK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61133.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_072_000M1_scaffold_847_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7244..7603)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CWL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61132.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_072_000M1_scaffold_847_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7622..9412)
DNA (1791bp) protein (597aa)
Uncharacterized protein n=2 Tax=root RepID=R0B9J3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61131.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
TraG/TraD family
L3_072_000M1_scaffold_847_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9402..9605)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0B9Q1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61130.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_072_000M1_scaffold_847_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9617..10501)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CUU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61129.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
LtrC-like protein
L3_072_000M1_scaffold_847_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10507..11313)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CJJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61128.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_072_000M1_scaffold_847_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11297..12661)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CWK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61127.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Rlx-like protein
L3_072_000M1_scaffold_847_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12652..12993)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0B9I8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61126.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
MocB-like protein
L3_072_000M1_scaffold_847_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12962..13120)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0B9P6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61125.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_072_000M1_scaffold_847_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13245..13649)
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=root RepID=R0CUU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61124.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_072_000M1_scaffold_847_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13646..14602)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CJJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61123.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_072_000M1_scaffold_847_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14626..22464)
DNA (7839bp) protein (2613aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CWK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61122.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
putative helicase
L3_072_000M1_scaffold_847_20

Not on your lists

comp(22480..22761)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1T9U7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC69962.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_072_000M1_scaffold_847_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22742..22969)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0B9I2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61121.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_072_000M1_scaffold_847_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22983..23273)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=root RepID=R0B9P1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61120.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_072_000M1_scaffold_847_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23334..23423)
DNA (90bp) protein (30aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=G1VV04_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ61119.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_072_000M1_scaffold_847_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23423..27673)
DNA (4251bp) protein (1417aa)
Uncharacterized protein n=2 Tax=root RepID=R0CJI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61118.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Cna protein B-type domain.
L3_072_000M1_scaffold_847_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27748..28431)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CWJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61117.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Signal recognition particle-docking protein FtsY
L3_072_000M1_scaffold_847_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28672..29607)
DNA (936bp) protein (312aa)
ParB-like partition protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0B9H6_9CLOT
ParB-like partition protein {ECO:0000313|EMBL:ENZ61116.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ParB-like partition proteins
L3_072_000M1_scaffold_847_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29564..30388)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0B9N6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61115.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Chromosome partitioning protein parA
L3_072_000M1_scaffold_847_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30934..31107)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKW2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83326.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_072_000M1_scaffold_847_29
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31104..32492)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04484.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_072_000M1_scaffold_847_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32630..33073)
DNA (444bp) protein (148aa)
Acetyltransferases n=2 Tax=Clostridiales RepID=R7NEY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM99401.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Acetyltransferases
Displaying items 1-30 of 45 in total

View Taxonomy