ggKbase home page

L3_072_000M1_scaffold_853

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_853_1
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..2487
DNA (2487bp) protein (829aa)
Outer membrane protein, OMP85 family n=3 Tax=Bacteroidetes RepID=F3XRK1_9FLAO
Outer membrane protein OMP85 family {ECO:0000313|EMBL:CCZ00464.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_853_2
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2634..3545
DNA (912bp) protein (304aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3XRK0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CCZ00465.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_853_3
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3725..4810
DNA (1086bp) protein (362aa)
Site-specific recombinase phage integrase family n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NSY2_9BACT
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CCZ00466.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
integrase
L3_072_000M1_scaffold_853_4
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5016..8093
DNA (3078bp) protein (1026aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NU85_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ00467.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_853_5
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8193..8927)
DNA (735bp) protein (245aa)
Methyltransferase domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5N9R5_9BACT
Methyltransferase domain protein {ECO:0000313|EMBL:CCZ00468.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
putative methyltransferase protein
L3_072_000M1_scaffold_853_6
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9109..9681
DNA (573bp) protein (191aa)
Transcriptional regulator AraC family n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NEM5_9BACT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ00469.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
AraC family transcriptional regulator
L3_072_000M1_scaffold_853_7
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9730..11970
DNA (2241bp) protein (747aa)
Copper-exporting ATPase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5N8S3_9BACT
Copper-exporting ATPase {ECO:0000313|EMBL:CCZ00470.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
putative copper transport-related membrane protein
L3_072_000M1_scaffold_853_8
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11954..12160
DNA (207bp) protein (69aa)
Copper-exporting ATPase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5N8S3_9BACT
Copper-exporting ATPase {ECO:0000313|EMBL:CCZ00470.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Cation transport ATPase
L3_072_000M1_scaffold_853_9
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12176..12991
DNA (816bp) protein (272aa)
4Fe-4S binding domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NSY9_9BACT
4Fe-4S binding domain protein {ECO:0000313|EMBL:CCZ00471.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
ferredoxin
L3_072_000M1_scaffold_853_10
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13665..15044
DNA (1380bp) protein (460aa)
PTS system Galactitol-specific IIC component n=2 Tax=Bacteroidetes RepID=F3XRI9_9FLAO
PTS system Galactitol-specific IIC component {ECO:0000313|EMBL:EHH01025.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
PTS system Galactitol-specific IIC component
L3_072_000M1_scaffold_853_11
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15104..16060
DNA (957bp) protein (319aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=3 Tax=Bacteroidetes RepID=F3XRI8_9FLAO
L3_072_000M1_scaffold_853_12
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16211..16678
DNA (468bp) protein (156aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3XRI6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CCZ00474.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_853_13
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16776..17969)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5N8S8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ00475.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_853_14
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17966..19786)
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NSZ4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ00476.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_853_15
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19842..21179)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NU99_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ00477.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_853_16
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21324..22328
DNA (1005bp) protein (335aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5N9T3_9BACT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CCZ00478.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
putative cell wall biosynthesis related protein
L3_072_000M1_scaffold_853_17
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22434..24137)
DNA (1704bp) protein (568aa)
Conserved domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NEN6_9BACT
Conserved domain protein {ECO:0000313|EMBL:CCZ00479.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L3_072_000M1_scaffold_853_18
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24237..30818)
DNA (6582bp) protein (2194aa)
Dockerin type I repeat-containing domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5N8T5_9BACT
Dockerin type I repeat-containing domain protein {ECO:0000313|EMBL:CCZ00480.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L3_072_000M1_scaffold_853_19
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31540..31917)
DNA (378bp) protein (126aa)
LytTr DNA-binding domain protein n=3 Tax=Bacteroidetes RepID=F3XRH9_9FLAO
LytTr DNA-binding domain protein {ECO:0000313|EMBL:CCZ00481.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L3_072_000M1_scaffold_853_20
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32484..33944)
DNA (1461bp) protein (487aa)
Transporter, major facilitator family protein n=2 Tax=Bacteroidetes RepID=F3XRH7_9FLAO
Transporter, major facilitator family protein {ECO:0000313|EMBL:EHH01035.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
MFS transporter
L3_072_000M1_scaffold_853_21
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33959..35059)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3XRH6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CCZ00483.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
sodium:proton antiporter
L3_072_000M1_scaffold_853_22
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35085..35864)
DNA (780bp) protein (260aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NEP1_9BACT
putative methyltransferase
L3_072_000M1_scaffold_853_23
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35906..36337)
DNA (432bp) protein (144aa)
Toxin-antitoxin system toxin component, PIN family n=3 Tax=Bacteroidetes RepID=F3XRH4_9FLAO
Toxin-antitoxin system toxin component PIN family {ECO:0000313|EMBL:CCZ00485.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
twitching mobility protein PilT
L3_072_000M1_scaffold_853_24
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36334..36504)
DNA (171bp) protein (57aa)
Conserved domain protein n=3 Tax=Bacteroidetes RepID=F3XRH3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CCZ00486.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L3_072_000M1_scaffold_853_25
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36688..36921)
DNA (234bp) protein (78aa)
Conserved domain protein n=3 Tax=Bacteroidetes RepID=F3XRH2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CCZ00487.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_072_000M1_scaffold_853_26
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36949..37572)
DNA (624bp) protein (208aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3XRH1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHH01041.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L3_072_000M1_scaffold_853_27
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37598..38620)
DNA (1023bp) protein (341aa)
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NEP6_9BACT
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:CCZ00489.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L3_072_000M1_scaffold_853_28
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38749..38955)
DNA (207bp) protein (69aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Exodeoxyribonuclease 7 small subunit n=3 Tax=Bacteroidetes RepID=F3XRG9_9FLAO
exodeoxyribonuclease 7 small subunit
L3_072_000M1_scaffold_853_29
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38966..40261)
DNA (1296bp) protein (432aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NT13_9BACT
L3_072_000M1_scaffold_853_30
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40263..41399)
DNA (1137bp) protein (379aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NUB5_9BACT
tRNA-specific 2-thiouridylase mnmA
Displaying items 1-30 of 47 in total

View Taxonomy