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L3_072_000M1_scaffold_934

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_934_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..280
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UG91_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74699.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000M1_scaffold_934_2
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(456..695)
DNA (240bp) protein (80aa)
Transposase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U944_9BACE
Transposase {ECO:0000313|EMBL:CCZ74698.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative transposase
L3_072_000M1_scaffold_934_3
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(934..1035)
DNA (102bp) protein (34aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M6G6_9BACE
Transposase {ECO:0000313|EMBL:EFI13457.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_072_000M1_scaffold_934_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1215..3611)
DNA (2397bp) protein (799aa)
Glucosyl hydrolase family protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5V175_9BACE
Glucosyl hydrolase family protein {ECO:0000313|EMBL:CCZ74697.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
glucosyl hydrolase family protein
L3_072_000M1_scaffold_934_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4209..5318)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UU77_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74696.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Ig domain-containing protein
L3_072_000M1_scaffold_934_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5331..7625)
DNA (2295bp) protein (765aa)
F5/8 type C domain protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U9M1_9BACE
F5/8 type C domain protein {ECO:0000313|EMBL:CCZ74695.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000M1_scaffold_934_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7729..9723)
DNA (1995bp) protein (665aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UG87_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74694.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RagB/SusD domain-containing protein
L3_072_000M1_scaffold_934_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9736..13149)
DNA (3414bp) protein (1138aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U938_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CCZ74693.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
TonB-dependent receptor plug
L3_072_000M1_scaffold_934_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13280..14269)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5V171_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74692.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
anti-FecI sigma factor, FecR
L3_072_000M1_scaffold_934_10
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14563..15108
DNA (546bp) protein (182aa)
RNA polymerase sigma-70 factor expansion family 1 n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UU72_9BACE
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CCZ74691.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_072_000M1_scaffold_934_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15986..16384)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U9L7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74690.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Protein of unknown function (DUF2500).
L3_072_000M1_scaffold_934_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16563..18107)
DNA (1545bp) protein (515aa)
PKD domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHN6_9BACE
PKD domain protein {ECO:0000313|EMBL:EDM20241.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
FOG: PKD repeat
L3_072_000M1_scaffold_934_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18138..19247)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9PUF1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74688.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
exo-alpha-sialidase
L3_072_000M1_scaffold_934_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19260..20717)
DNA (1458bp) protein (486aa)
SusD family protein n=2 Tax=Bacteroides RepID=A5ZHN4_9BACE
SusD family protein {ECO:0000313|EMBL:CCZ74687.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
glycan metabolism protein RagB
L3_072_000M1_scaffold_934_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20735..23998)
DNA (3264bp) protein (1088aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=A5ZHN3_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CCZ74686.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Outer membrane receptor proteins, mostly Fe transport
L3_072_000M1_scaffold_934_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24069..25493)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZHN2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20041.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
sialic acid-specific acetylesterase
L3_072_000M1_scaffold_934_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25512..26747)
DNA (1236bp) protein (412aa)
Transporter, major facilitator family protein n=2 Tax=Bacteroides caccae RepID=A5ZHN1_9BACE
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDM20236.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Sugar phosphate permease
L3_072_000M1_scaffold_934_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26751..28391)
DNA (1641bp) protein (547aa)
BNR/Asp-box repeat. (EC:3.2.1.18)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U932_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74683.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_072_000M1_scaffold_934_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28510..29421)
DNA (912bp) protein (304aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase (EC:4.1.3.3)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EIU1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20044.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_000M1_scaffold_934_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29448..30470)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V0R7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20045.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000M1_scaffold_934_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30518..31270)
DNA (753bp) protein (251aa)
Transcriptional regulator, GntR family n=3 Tax=Bacteroides RepID=A5ZHM7_9BACE
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDM20232.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
transcriptional regulator, GntR family
L3_072_000M1_scaffold_934_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31346..31600
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHM6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20231.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_072_000M1_scaffold_934_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31688..34108)
DNA (2421bp) protein (807aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PUF7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20048.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ABC transporter permease
L3_072_000M1_scaffold_934_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34105..34821)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EIU7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20049.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ABC transporter ATP-binding protein
L3_072_000M1_scaffold_934_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34843..37251)
DNA (2409bp) protein (803aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V0S4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20050.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative FtsX-related transporter permease
L3_072_000M1_scaffold_934_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37261..38508)
DNA (1248bp) protein (416aa)
Efflux transporter, RND family, MFP subunit n=3 Tax=Bacteroides RepID=A5ZHM2_9BACE
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CCZ74675.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative HlyD-family transporter component
L3_072_000M1_scaffold_934_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38594..39895)
DNA (1302bp) protein (434aa)
Outer membrane efflux protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHM1_9BACE
Outer membrane efflux protein {ECO:0000313|EMBL:EDM20226.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
outer membrane efflux protein
L3_072_000M1_scaffold_934_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40176..41633
DNA (1458bp) protein (486aa)
Sigma-54 interaction domain protein n=2 Tax=Bacteroides caccae RepID=A5ZHM0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20053.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
two-component system response regulator
L3_072_000M1_scaffold_934_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41639..42892
DNA (1254bp) protein (418aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5V156_9BACE
two-component system sensor histidine kinase
L3_072_000M1_scaffold_934_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42952..43977
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UU54_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74671.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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