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L3_072_000M1_scaffold_129_13

Organism: L3_072_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 20
Location: 47997..51695

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 1252.0
  • Bit_score: 1377
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=5 Tax=Clostridium thermocellum RepID=E6URP4_CLOTL similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 1252.0
  • Bit_score: 1379
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 1252.0
  • Bit_score: 1379
  • Evalue 0.0

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Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3699
ATGTTAAATACTGATAATATCAAAAAGATTAAGTATGGCAATAATATCCGTTATACTTTTGGCAAAACTAAAGAAGCAGATATGCCTTACTTGTTAGAAATCCAAAAAGATTCCTATCAAAAGTTTATCAAAGAAGGAATAGGCGAAGCCTTGAAAGAATTTTCACCTATCACAGACTATGCTGGAAAAGCAGAAGTCTATTTTTTGGACTATGTCATTGATGAACATCCAAAACTATCTAAGGCAGAAACCAAAAGAAAGGGCGGGCATTATAGTGTTCCTTTGAGAGTTAAGGTTAGACTTGTTATCAAAGAAACTGGCGAAGCTATTGAACAAGAAGTTTATTTGGGTGATATTCCTTATATGACCGAAGCAGGTACTTTTATATTCAACGGAATTGAAAGAGTAATTGTTTCTCAAATCGTTAGAAGCCCAAGTGTATACTTTTCAAAAAAACTAGACAAAACCGGTAGAGAAATCTTTGCTAGTACTCTTAATCCAAAACGTGGTAGTTGGTTGGAAATTGAACAAAAAGAAAAAGAACCTAACCAACTAAAAGTTTGTCTTGATAAGGGTGGCAAAATATCTCTTGGTATCTTCCTTAAGTGTTTTGGACTAACTAGAGAGAACATTCTTGATACTTTTGGCGACAATGAGATAATGAAAGCAACTCTTGACAAAGACGCTTATGAAACTCAACACGATGCACTTATTGAACTTTCAAGAAAAACTAGACCTAGTGAAATTCCTAGTGCCGAAGCTACAAAACAATTTATCTTCTCGCAATTTTTCAGTACACAATTTTATAATATTGGCGATGTTGGTAGATTCAAAGTCGACAAAAAACTTGCACTATACAACCGTTTGATTGGTTTGACTGCGGGCGAAGATATCAAAGACAAAAAGACTGTAATTGTTCCAGCGGGCGAAGTTATTACTAGAGAAAAAGCATACGAAATCCAAAACTTGGGAATTAATAGTGTGTGGGTGCTTGTTGATGGCAAAAAACACAAAATGTATGGCAACAATAGAGTAAAACTTAGCGAAGTTATCAAATGTAACGAAAAAGAATTGGGTATCAACCAAATGGTTTATTATCCAGTACTTGCTGATATTTTGAAAGAATACAAGACTAAGGAAGAAAGAATTGAAGCTATTAGAGCCAATGCTGAAAATCTAGTTGGAAGCACTCTAACTATTGATGATATTTTGGCAACAGTAAGTTACTTCTTAGATTTGAACGTTGGAATTGGCGAAGTTGATAACATTGACCATCTATGCAACCGTAGAATCAAGGGTGCAGGCGAACTTTTGCAAGACGCATTCAGAAGTGGTATGAACAAACTTTCCAATGCTGTCAAAGAAACTTTGCAATCTCATGACTTAAATGATATAAGTCCATCTCAAGTTGTTAATGCTAGACCTATTAATCGTGCATTCAAAGATTTTCTAGCTTCTCACCAATTGAGCCAACTTATGGACGAAATGAACCCACTTAGTTCACTTGCTCAAAAACGTAGACTTTCGGCAGTTGGACCAGGTGGTATCAAAAAAGACAGAGCAACAGACGAAGTCAGAGATATTCACCATAGTCACTACGGAAGACTTTGTGTTATTGAAACACCAGAAGGTGGAAATATCGGTCTTATTAACTCGCTTGCTAGTTTTGCAAGAGTTAATGAATATGGTTTTATTGAAACAGCTTATAGAGTTGTTAACAAAGATAAGGGCGTTGTAACAAACGAAGTCGTTTATTTAATGGCTGACGAAGACGAAAATTGTTACATTGCTCAAGCAACTGAACCTTTGAATGTTGATGGTTCTTTTGTAAACAAGAGAATTATTTGTAGATACAAAGACACAATATTGGAAGTTGACAAGGAAATGGTTGACTATATGGACGTATCTCCAAGACAACTTATATCCGTTCCAACTTCACTTATTCCGTTCCTTCAAAACGATGATACTGCTAGAGCATTGATGGGTGCAAACATGCAACGTCAAGCAGTTCCACTAATTACTACCGAAGCGCCAATTGTTGCAACCGGTATGGAACACAAAATTGCTCTTGATAACTGTGCAATTACAGTTGCTAAAAATAGCGGTACTGTAACATATGTTGATTCAAATCAAGTAATTGTTACTCTTGATGACGGAACTGAAGAAAAATACGAATTAACAAAATTCACAAAAACAAACCAAGAAAGTTGTATTAACCAAAAACCTATCGTCAAAAAGGGTCAAAAAGTTAAGAAAGGTGACACTTTGATTGACGGATATAGTACTAATGGTGGAGAACTTGCACTTGGTAAAAATATGCTTATTGCCTTCATGAACTGGGAAGGTTACAACTACGAAGACGCTATTTTGCTTAGCGAAAGACTTGTCAAAGAAGACGTTTATACTTCTATTACTCTTAAGGAAGAAGAAGTTAAATGTAGAACAACAAAACTTGGCGACGAAGAATTTACAAGAGATATTCCAAATCTTGGTGACGATGTTCTCAAAAACTTGGATGAAAACGGTATTATTAGAATCGGTGCCGAAGTTAAACCAGGAGACATTCTAGTAGGTAAGGTTACTCCTAAGGGTGAAACCGAACCAACTCCAGAAGAAAGATTGCTTAGAGCTATCTTTGGTGAAAAGGCTAGAGATGTCAAAGATACTTCACTTAGAGTTCCACATGGAATTAGCGGTGTAGTCGTTGATATTCAAGTATTCTCTCGTAAGAACAAAGACGAACTTGAAACTGGTGTTAACCAAATGGTTAGAGTAACTATTGCGCAAAAACGTAAGATTAGTGTCGGTGACAAAATGGCTGGACGTCATGGTAACAAAGGTATTGTTTCACGTATTCTTCCAGTTGAAGATATGCCATTTATGGCTAATGGTCAACCAATTGATATCGTACTTAACCCTCTAGGTATTCCATCTCGTATGAACGTAGGACAGGTTTTGGAAGTTCACTTGGGACTTGTTGCTAAGGCACTTGGAATTAAGATTGCAACTCCAGTATTTGATGGAGTTAACGAAGCAGATATTAGAGAGCTTCTCAAAGAAAACAACTTCCCAGAGAACGGAAAAATTCAACTTTATGACGGACGTACTGGAGAGCCATTTGAAAACCCAGTTACAGTTGGATATATGTACTATATCAAACTTGAACACATGGTTAACGACAAAATGCACGCAAGGTCAACTGGTCCTTATGCTTATGTTACACAACAACCACTTGGTGGTAAGGCTATGTTTGGTGGTCAGAGATTTGGTGAAATGGAAGTTTGGGCTTTGGAAGCATATGGTGCAACCAAGTTATTACAAGAAATGTTGACCGTTAAATCTGATGATACCGAAGGAAGACTTGCAACATACAAGGCAATTGTTGAAGGTTTGCCACTTCCAGAACCAGGCATGCCAGAATCGTTCAAGGTTCTTATTAGGGAATTGCAAGGTTTGGGTCTTGATGTTCAATTACGTAATGACCAAGGCAAAGAATTCGCACTTGGAGATTTGAATTCGGATACAGTTGAGACATTTGCCGAAGCTACTAAGCCTAGAGAAGAAGTCAAAGATATTGAACTTGACTTTGATGCTCCAACGCCAGAAACTGCTTTGGAAGAAAATTTGGAAAGCGACGAAGATTTTGATAATATATTTGATGAGTCAGATTTATTTGATGACTTTGATGAAGAAGAATAA
PROTEIN sequence
Length: 1233
MLNTDNIKKIKYGNNIRYTFGKTKEADMPYLLEIQKDSYQKFIKEGIGEALKEFSPITDYAGKAEVYFLDYVIDEHPKLSKAETKRKGGHYSVPLRVKVRLVIKETGEAIEQEVYLGDIPYMTEAGTFIFNGIERVIVSQIVRSPSVYFSKKLDKTGREIFASTLNPKRGSWLEIEQKEKEPNQLKVCLDKGGKISLGIFLKCFGLTRENILDTFGDNEIMKATLDKDAYETQHDALIELSRKTRPSEIPSAEATKQFIFSQFFSTQFYNIGDVGRFKVDKKLALYNRLIGLTAGEDIKDKKTVIVPAGEVITREKAYEIQNLGINSVWVLVDGKKHKMYGNNRVKLSEVIKCNEKELGINQMVYYPVLADILKEYKTKEERIEAIRANAENLVGSTLTIDDILATVSYFLDLNVGIGEVDNIDHLCNRRIKGAGELLQDAFRSGMNKLSNAVKETLQSHDLNDISPSQVVNARPINRAFKDFLASHQLSQLMDEMNPLSSLAQKRRLSAVGPGGIKKDRATDEVRDIHHSHYGRLCVIETPEGGNIGLINSLASFARVNEYGFIETAYRVVNKDKGVVTNEVVYLMADEDENCYIAQATEPLNVDGSFVNKRIICRYKDTILEVDKEMVDYMDVSPRQLISVPTSLIPFLQNDDTARALMGANMQRQAVPLITTEAPIVATGMEHKIALDNCAITVAKNSGTVTYVDSNQVIVTLDDGTEEKYELTKFTKTNQESCINQKPIVKKGQKVKKGDTLIDGYSTNGGELALGKNMLIAFMNWEGYNYEDAILLSERLVKEDVYTSITLKEEEVKCRTTKLGDEEFTRDIPNLGDDVLKNLDENGIIRIGAEVKPGDILVGKVTPKGETEPTPEERLLRAIFGEKARDVKDTSLRVPHGISGVVVDIQVFSRKNKDELETGVNQMVRVTIAQKRKISVGDKMAGRHGNKGIVSRILPVEDMPFMANGQPIDIVLNPLGIPSRMNVGQVLEVHLGLVAKALGIKIATPVFDGVNEADIRELLKENNFPENGKIQLYDGRTGEPFENPVTVGYMYYIKLEHMVNDKMHARSTGPYAYVTQQPLGGKAMFGGQRFGEMEVWALEAYGATKLLQEMLTVKSDDTEGRLATYKAIVEGLPLPEPGMPESFKVLIRELQGLGLDVQLRNDQGKEFALGDLNSDTVETFAEATKPREEVKDIELDFDAPTPETALEENLESDEDFDNIFDESDLFDDFDEEE*