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L3_072_000M1_scaffold_129

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_129_1
unknown

Not on your lists

comp(398..679)
DNA (282bp) protein (94aa)

This feature has no annotations

L3_072_000M1_scaffold_129_2
unknown

Not on your lists

comp(696..1061)
DNA (366bp) protein (122aa)

This feature has no annotations

L3_072_000M1_scaffold_129_3
unknown

Not on your lists

comp(1052..1339)
DNA (288bp) protein (96aa)

This feature has no annotations

L3_072_000M1_scaffold_129_4
unknown

Not on your lists

1538..2689
DNA (1152bp) protein (384aa)

This feature has no annotations

L3_072_000M1_scaffold_129_5
Bacillus methanolicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2800..3963)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2EBF9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE61089.1}; TaxID=796606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus methanolicus MGA3.;"
L3_072_000M1_scaffold_129_6
unknown

Not on your lists

4157..4531
DNA (375bp) protein (125aa)

This feature has no annotations

L3_072_000M1_scaffold_129_7
Acidaminococcus sp. CAG:917, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4593..5174
DNA (582bp) protein (194aa)
Putative membrane protein n=1 Tax=Acidaminococcus sp. CAG:917 RepID=R7KBU1_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDE73183.1}; TaxID=1262688 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus sp. CAG:917.;"
peptidase M23B
L3_072_000M1_scaffold_129_8
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5264..5497
DNA (234bp) protein (78aa)
Acyl carrier protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CU02_9CLOT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
acyl carrier protein
L3_072_000M1_scaffold_129_9
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

5627..5869
DNA (243bp) protein (81aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IP47_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:CCY42039.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
sporulation transcriptional regulator SpoIIID
L3_072_000M1_scaffold_129_10
unknown

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6014..10168
DNA (4155bp) protein (1385aa)

This feature has no annotations

L3_072_000M1_scaffold_129_11
unknown

Not on your lists

10143..21416
DNA (11274bp) protein (3758aa)

This feature has no annotations

L3_072_000M1_scaffold_129_12
unknown

Not on your lists

21711..47426
DNA (25716bp) protein (8572aa)

This feature has no annotations

L3_072_000M1_scaffold_129_13
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47997..51695
DNA (3699bp) protein (1233aa)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
DNA-directed RNA polymerase subunit beta n=5 Tax=Clostridium thermocellum RepID=E6URP4_CLOTL
DNA-directed RNA polymerase subunit beta
L3_072_000M1_scaffold_129_14
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51707..55309
DNA (3603bp) protein (1201aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
DNA-directed RNA polymerase beta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VKP4_CLOSH
L3_072_000M1_scaffold_129_15
unknown

Not on your lists

55575..55871
DNA (297bp) protein (99aa)

This feature has no annotations

L3_072_000M1_scaffold_129_16
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56014..56997
DNA (984bp) protein (328aa)
Fibronectin type III domain protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ERM5_9FIRM
hypothetical protein
Fibronectin type III domain protein {ECO:0000313|EMBL:CDE04903.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_072_000M1_scaffold_129_17
unknown

Not on your lists

57134..57412
DNA (279bp) protein (93aa)

This feature has no annotations

L3_072_000M1_scaffold_129_18
Acidaminococcus sp. CAG:917, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


58054..58425
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=1 Tax=Acidaminococcus sp. CAG:917 RepID=R7K7X9_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1262688 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus sp. CAG:917.;"
rpsL; 30S ribosomal protein S12
L3_072_000M1_scaffold_129_19
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


58477..58947
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K5Q9_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
30S ribosomal protein S7
L3_072_000M1_scaffold_129_20
Thermoanaerobacter wiegelii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

58966..61011
DNA (2046bp) protein (682aa)
Elongation factor G n=2 Tax=Thermoanaerobacter RepID=I8QXN6_9THEO
translation elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=697303 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter wiegelii Rt8.B1.;"
L3_072_000M1_scaffold_129_21
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61047..62249
DNA (1203bp) protein (401aa)
Elongation factor Tu n=1 Tax=Clostridium sp. CAG:138 RepID=R6AJI7_9CLOT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
translation elongation factor Tu
L3_072_000M1_scaffold_129_22
Pan troglodytes, Pan, Primates, Mammalia, Chordata, Metazoa

Not on your lists

62430..64598
DNA (2169bp) protein (723aa)
Dentin sialophosphoprotein (Fragment) n=1 Tax=Pan troglodytes RepID=C9W8C7_PANTR
Dentin sialophosphoprotein {ECO:0000313|EMBL:ACN91273.1}; Flags: Fragment;; TaxID=9598 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan.;" source="Pan troglodytes (Chimpanzee).;"
hypothetical protein
L3_072_000M1_scaffold_129_23
unknown

Not on your lists

64725..65711
DNA (987bp) protein (329aa)

This feature has no annotations

L3_072_000M1_scaffold_129_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


66010..66159
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UBN8_9CLOT
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
rpmG; 50S ribosomal protein L33
L3_072_000M1_scaffold_129_25
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

66187..66504
DNA (318bp) protein (106aa)
Protein translocase subunit SecE n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GSV1_9FIRM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
L3_072_000M1_scaffold_129_26
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

Not on your lists

66529..67218
DNA (690bp) protein (230aa)
Transcription termination/antitermination protein NusG n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6HGE1_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
nusG; transcription antitermination protein NusG
L3_072_000M1_scaffold_129_27
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

Not on your lists


67329..67757
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GHZ7_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
50S ribosomal protein L11
L3_072_000M1_scaffold_129_28
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


67818..68498
DNA (681bp) protein (227aa)
50S ribosomal protein L1 n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K763_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
rplA; ribosomal protein L1
L3_072_000M1_scaffold_129_29
unknown

Not on your lists

comp(68666..69313)
DNA (648bp) protein (216aa)

This feature has no annotations

L3_072_000M1_scaffold_129_30
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69518..71092
DNA (1575bp) protein (525aa)
ABC transporter ATP-binding protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G3C9_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE21939.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
ABC transporter ATPase
Displaying items 1-30 of 116 in total

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