ggKbase home page

L3_072_000M1_scaffold_50_12

Organism: L3_072_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 20
Location: comp(9069..9812)

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=1 Tax=Clostridium sp. CAG:628 RepID=R7ME82_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 255.0
  • Bit_score: 296
  • Evalue 1.60e-77
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:CDE99394.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 255.0
  • Bit_score: 296
  • Evalue 2.30e-77
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 221.0
  • Bit_score: 159
  • Evalue 1.10e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:628 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 744
ATGAAATTCATTAACAAGATTAATTTGTTTTTTACTAATTTGTTTGATAAGGATGAGAAGTATGTTCTTATTAATTCTATTATTATTTTTCTTCCTGTTATTTTTATTTGGGAAGAATTTTTACTTAAGTTTATTACACTTTTAAGTTTCGTTACTGCAGCAATTGCATATAGTTTATGGGATACTATTATTAATTTTTTTACTGGTATTTATATTAAAGTTAGCAAGCCATTTAGTATAGAAGATAGAATTATGATAGATGGATATATGGGAGATGTTATTAATATTTCTACTCTTAGTTTTGATATTTTAGAGGTTGATCCATTTTCATTTCAAAGTACAGGTACAATAGTGTATGTCCCAAATAGTAAAGTATTTTCCAAGGTTACTAAGAATTATGTTAAAGCTTTTAAGTATATTTGGGGTGAGATTGAAGTTAAGGTTAATATTGATAGTGATTTAAAAAGGGCTAAAAGTAAACTTTATAGGATAGTAAATAGTAATGAAGTTATTAAGAGAATACCAAATAAAATGAGAGGCGCACTTGAAGTTAATGATAAGTATAGAATTTATTACAATAAGTTAGAGCCTATTATTTATATGAATGTTAGTGGTAGTTATGTTTCTTTATATATTAGATTTTTAATTCATCCTAAAAAGAAGAGAAATATTGAAAATGAAATTTGGAGTGAGATATACAAGTGTTATAATAATAAAGAACTATCTTTGTATGTGGAAAAGTAG
PROTEIN sequence
Length: 248
MKFINKINLFFTNLFDKDEKYVLINSIIIFLPVIFIWEEFLLKFITLLSFVTAAIAYSLWDTIINFFTGIYIKVSKPFSIEDRIMIDGYMGDVINISTLSFDILEVDPFSFQSTGTIVYVPNSKVFSKVTKNYVKAFKYIWGEIEVKVNIDSDLKRAKSKLYRIVNSNEVIKRIPNKMRGALEVNDKYRIYYNKLEPIIYMNVSGSYVSLYIRFLIHPKKKRNIENEIWSEIYKCYNNKELSLYVEK*