ggKbase home page

L3_072_000M1_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 137 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_50_1
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

287..478
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MFH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE99390.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
hypothetical protein
L3_072_000M1_scaffold_50_2
Clostridium sp. CAG:524, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1171..2481
DNA (1311bp) protein (437aa)
Putative gamma-D-glutamyl-L-diamino acid endopeptidase 1 n=1 Tax=Clostridium sp. CAG:524 RepID=R6BGB2_9CLOT
Putative gamma-D-glutamyl-L-diamino acid endopeptidase 1 {ECO:0000313|EMBL:CDA59804.1}; TaxID=1262817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:524.;"
L3_072_000M1_scaffold_50_3
Mycoplasma sp. CAG:776, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(2671..2898)
DNA (228bp) protein (76aa)
Putative Xre family DNA-binding protein n=1 Tax=Mycoplasma sp. CAG:776 RepID=R7NI25_9MOLU
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:CDF11737.1}; TaxID=1262906 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:776.;"
putative Xre family DNA-binding protein
L3_072_000M1_scaffold_50_4
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2991..3602
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MIM7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE99587.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
L3_072_000M1_scaffold_50_5
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3690..4352
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MIM7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE99587.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
L3_072_000M1_scaffold_50_6
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4432..4761
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MI32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE99392.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
L3_072_000M1_scaffold_50_7
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4763..5683
DNA (921bp) protein (307aa)
Glycosyl hydrolase family 25 n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5VRN8_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:CCZ83222.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
peptidase M15A
L3_072_000M1_scaffold_50_8
Mycoplasma sp. CAG:776, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(5676..7037)
DNA (1362bp) protein (454aa)
DNA ligase D n=1 Tax=Mycoplasma sp. CAG:776 RepID=R7NIW5_9MOLU
DNA ligase D {ECO:0000313|EMBL:CDF12037.1}; TaxID=1262906 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:776.;"
DNA ligase D
L3_072_000M1_scaffold_50_9
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(7034..7924)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IHX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51076.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
DNA polymerase LigD, ligase domain-containing protein
L3_072_000M1_scaffold_50_10
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(7911..8663)
DNA (753bp) protein (251aa)
Probable DNA repair protein HOLDEFILI_02480 n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IGZ0_9FIRM
Probable DNA repair protein HOLDEFILI_02480 {ECO:0000313|EMBL:CDE51074.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
Ku domain protein
L3_072_000M1_scaffold_50_11
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8766..9059
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MI32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE99392.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
L3_072_000M1_scaffold_50_12
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9069..9812)
DNA (744bp) protein (248aa)
MscS Mechanosensitive ion channel n=1 Tax=Clostridium sp. CAG:628 RepID=R7ME82_9CLOT
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:CDE99394.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
mechanosensitive ion channel MscS
L3_072_000M1_scaffold_50_13
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9938..10699
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MFH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE99395.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
L3_072_000M1_scaffold_50_14
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10668..12995
DNA (2328bp) protein (776aa)
Phosphoketolase (EC:4.1.2.22)
Probable phosphoketolase n=1 Tax=Clostridium sp. CAG:628 RepID=R7MGA7_9CLOT
Probable phosphoketolase {ECO:0000313|EMBL:CDE99396.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
L3_072_000M1_scaffold_50_15
unknown

Not on your lists

13269..13373
DNA (105bp) protein (35aa)

This feature has no annotations

L3_072_000M1_scaffold_50_16
unknown

Not on your lists

13588..14106
DNA (519bp) protein (173aa)

This feature has no annotations

L3_072_000M1_scaffold_50_17
unknown

Not on your lists

14199..14888
DNA (690bp) protein (230aa)

This feature has no annotations

L3_072_000M1_scaffold_50_18
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14899..15687)
DNA (789bp) protein (263aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium sp. CAG:628 RepID=R7MCW1_9CLOT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDE98470.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
binding-protein-dependent transport system inner membrane protein
L3_072_000M1_scaffold_50_19
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15674..16423)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MDL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE98471.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
ABC transporter ATPase subunit
L3_072_000M1_scaffold_50_20
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16416..17399)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MFE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE98472.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
ABC transporter substrate-binding protein
L3_072_000M1_scaffold_50_21
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17502..18062
DNA (561bp) protein (187aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Clostridium sp. CAG:628 RepID=R7MEW4_9CLOT
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:CDE98473.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
phospholipid/glycerol acyltransferase
L3_072_000M1_scaffold_50_22
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18055..18624
DNA (570bp) protein (190aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
Phospholipid/glycerol acyltransferase n=1 Tax=Clostridium sp. CAG:628 RepID=R7MBM6_9CLOT
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:CDE98474.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
L3_072_000M1_scaffold_50_23
Mycoplasma sp. CAG:472, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

18726..20102
DNA (1377bp) protein (459aa)
Putative alginate O-acetyltransferase AlgI n=1 Tax=Mycoplasma sp. CAG:472 RepID=R7HFA3_9MOLU
Putative alginate O-acetyltransferase AlgI {ECO:0000313|EMBL:CDE38294.1}; TaxID=1262904 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:472.;"
membrane bound O-acyl transferase MBOAT family protein
L3_072_000M1_scaffold_50_24
Mycoplasma sp. CAG:472, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

20112..21200
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Mycoplasma sp. CAG:472 RepID=R7HFY3_9MOLU
Uncharacterized protein {ECO:0000313|EMBL:CDE38295.1}; TaxID=1262904 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:472.;"
hypothetical protein
L3_072_000M1_scaffold_50_25
Clostridium sp. CAG:533, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21211..21684
DNA (474bp) protein (158aa)
PT repeat-containing protein n=1 Tax=Clostridium sp. CAG:533 RepID=R6AL52_9CLOT
PT repeat-containing protein {ECO:0000313|EMBL:CDA52728.1}; TaxID=1262818 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:533.;"
hypothetical protein
L3_072_000M1_scaffold_50_26
Mycoplasma sp. CAG:472, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

22016..22966
DNA (951bp) protein (317aa)
Putative platelet activating factor acetylhydrolase-like protein n=1 Tax=Mycoplasma sp. CAG:472 RepID=R7HFY5_9MOLU
Putative platelet activating factor acetylhydrolase-like protein {ECO:0000313|EMBL:CDE38300.1}; TaxID=1262904 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:472.;"
platelet activating factor acetylhydrolase-like protein
L3_072_000M1_scaffold_50_27
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23081..25375
DNA (2295bp) protein (765aa)
Dockerin type I repeat protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MCW5_9CLOT
Dockerin type I repeat protein {ECO:0000313|EMBL:CDE98475.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
L3_072_000M1_scaffold_50_28
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25385..26713
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MDL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE98476.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
glycoside hydrolase family 73 protein
L3_072_000M1_scaffold_50_29
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26752..28548
DNA (1797bp) protein (599aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MFF2_9CLOT
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:CDE98477.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
cell envelope-related function transcriptional attenuator common domain protein
L3_072_000M1_scaffold_50_30
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28619..29770
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MCI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE98764.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
Displaying items 1-30 of 137 in total

View Taxonomy