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L3_072_000M1_scaffold_272_14

Organism: L3_072_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 20
Location: comp(9451..9948)

Top 3 Functional Annotations

Value Algorithm Source
rpoD2; RNA polymerase factor sigma-70 RpoD (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 164.0
  • Bit_score: 147
  • Evalue 1.80e-33
RNA polymerase factor sigma-70 RpoD {ECO:0000313|EMBL:AGC68713.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AGC68713.1};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 164.0
  • Bit_score: 147
  • Evalue 8.70e-33
RNA polymerase factor sigma-70 RpoD n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VT55_CLOSH similarity UNIREF
DB: UNIREF100
  • Identity: 44.5
  • Coverage: 164.0
  • Bit_score: 147
  • Evalue 6.20e-33

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Taxonomy

[Clostridium] stercorarium → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 498
TTGAATCAAGCCCTGAGGAAAAGGGAAGAGACGGAGGATATATACAGGCGCAACATAGACGCCGTGTACCGGGTGTGCATGCTGTTCTTTAAGGGCAGCAGGGCGGACGCCGAGGACGCGGCCCAAAGCACCTTCTTGAAGCTTATGAAAAGCCCCGTCAGGTTTGAAAACGCGGCGCATGAAAAGTCGTGGCTCATAGTCGTCGCGTCCAATATATGCAGGGATTCCCTGAGGTCGGGCTGGAAAACGCGGGTGCAGTTAGATGAGGAGTCGCTGCAGGGCATACCGGCGGAGGAAAGCTCGGGAGACCTGCTGCGGCAGGTAATGGAGCTTCCTGACAAATGCAAGACGGCGGTATATATGTACTATTACGAGGGCTATACCTCTGGGGAGATAGCCGAGGCAATGGGCAAGAGCAGGGCGAGCGTGTGGGGGTACCTGCACAGCGGGCGGAAGCTTTTGCGTGAAGCGCTGAAGGAGGAAGGGTATGAAGGATAA
PROTEIN sequence
Length: 166
LNQALRKREETEDIYRRNIDAVYRVCMLFFKGSRADAEDAAQSTFLKLMKSPVRFENAAHEKSWLIVVASNICRDSLRSGWKTRVQLDEESLQGIPAEESSGDLLRQVMELPDKCKTAVYMYYYEGYTSGEIAEAMGKSRASVWGYLHSGRKLLREALKEEGYEG*