ggKbase home page
Advanced Search
Search Help

L3_072_000M1_scaffold_1268_20

Organism: L3_072_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 20
Location: 24024..28049

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 1341.0
  • Bit_score: 2661
  • Evalue 0.0
CRISPR-associated protein, Csn1 family n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CL59_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 1341.0
  • Bit_score: 2661
  • Evalue 0.0
CRISPR-associated endonuclease, Csn1 family similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 1342.0
  • Bit_score: 1974
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus lactaris → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 4026
ATGGGAAAAGGGTATTATGTAGGGCTTGATATGGGAACTGGATCTGTTGGATGGGCTGTAACGGATGAAAGCTATCAGATTCTCAGACGTCATGGAAAAGCAATGTGGGGTGTAAGACTTTTTGAAAGTGCTAAGACTGCGGAAGAGCGGAGAATGTTCAGAACAGGAAGGAGAAGACTGGACAGACGGGGATGGAGGATCGAGATTTTGCAGGAGATTTTTGCAGAAGAGATCAGCCGGGTTGATCCTGGATTTTTTCTGAGAATGAAAGAGAGTAAATATTATCCGGAAGATAAAAGAGATATACAGGGAAATTGCCCGGAACTTCCGTATACACTTTTTGTGGACAAGACTTTTACGGATAAGGATTTTCATAAAAAGTATCCGACAATTTATCATTTAAGAAAGATGCTGATGGAGACGGAAGATACTCCGGATATGCGACTTGTTTATCTGGCACTGCATCATATGATGAAGCATCGGGGACATTTTCTTCTTTCCGGTGATATCAGTCAGGTTACTGAATTTAAAAATACATTCAATCAGTTTATTGAGAATATCAGAAATGAAGAGATGGATTTTGAAATTGAACTGGATGAAAGTGCGGTTCAGATGATTGAGGAAACGTTAAAAGATAAAAATCTTACCCGTTCAGCGAAAAAGTCGAAACTGGTAAAAGGATTAAATGCAAAAAATGTCCGGGATAAAGCGTTTTTGACATTACTTTCAGGTGGAACAGTAAAACTGAGTGATCTGTTCGGAATGGAAGAACTGAATGAAGGAGAGAGACCAAAGATTTCTTTTGCGGATAATGGATATGAGGAATATGCGGCTGTCGTTGAAATGGAACTTGGTGAGCTGTACTATATCGTGGAGTCTGCAAAAGCCGTGTATGACTGGGCGATTCTTTCAGATATTTTGGGAGGAAGTACGTCTATTTCTGATGCGAAAGTCAGAGCGTATGAAAAGCACAAAGCAGATCTGAAGTATTTGAAAGCTGTCGTAAAAGAGTATTTTCCGAAAGAAGTTTATAATGCTGTATTTGTGGAAAGTTCGGATAAGTTGAACAATTATCCGGCGTATATTGGCATGACGAAGAAGAACGGAAAAAAGGTATCGCTTGAGGGAAAACGGTGCAGCAGGGAAGAATTTATGGATTTCTTGAAAAAGAATATTGTTGTAAAGCTGCCGGATGAAGAAGCTAAAATGTATCTGCAAAGTGAGCTTGAAAAGGATTCTTTTCTGCCAAAGCAGGTAAATAAGGATAATGGTGTTATTCCGTACCAGGTGCATAAATATGAACTGAAGAAGATTTTAGATAATCTGGGCGATAAAATTCCATTTTTAAAAGAAAATGCAGAAAAAATAGAAAAATTATTTAGTTTCAGGATTCCATATTATGTGGGACCACTTAGGACAGGCAATGGAGAAAATTCCAAATTTGCGTGGGCAGAGCGGAAAAGTACTGAGAAAATCTATCCGTGGAATTTTGAAAATGTAATTGATGTGGAGCAGAGTGCAGAAAATTTTATCCGTCGTATGACGAATAAATGCACTTATCTGATCGGAGAAGATGTATTGCCGAAAGATTCATTGCTTTACAGTAAATTTATGGTTCTGAACGAGTTAAATAATCTTCGGCTGGATGGACAGAAAATATCTGTAGAATTGAAGCAGAAGATTTATAGAGACGTTTTTTGCAGAAGCCGTAAAGTGACTCAGAAAAAACTGAAATCTTATCTGATCAGAGAGGGGATCGCCGGGAAAAATGTAGAATTGACGGGGATAGATGGAGATTTTAAAGGCTCATTGACAGCGTATCATGATTTTAAAGAAAAGCTGACAGGTGTGGAACTTACGCAGAAAGAAAAAGAAGAGATCATATTAAATATTGTGCTGTTTGGTGATGATAAGAAGCTTTTAAAGCAAAGACTAAAGAAAAAATTTCCGCAACTTACCGAAAAGCAGATTAATACAGTCACTGCACTTTCATATAAAGGATGGGGAAGATTGTCAAAAAAACTATTGGAAGAAGTGACTGTGCCTGCACCAGAAACTGGAGAGGTATGGAATATCATAACGGCATTGTGGGAGACGAATGATAATTTCATGCAACTGTTGAGCAAAGAATATCAATTTTCCGACAGGATAGAGGAGTTTAATGAGGAAAAGGCGGATCCGGAAGTGTCGTATCAGACAATAGAAGATCTGTATGTTTCACCTGCTGTGAAAAGACAGATCTGGCAGACATTACAGATCATTCAGGAAATTGAAAAAGTTATGGGAGAAAAGCCAAAAAGAGTCTTTGTTGAGATGGCAAGAGAAAAGCAGGAAAATAAGAGGACGGAATCAAGAAAAAAGACGCTGTCAGATTTGTACAAAAAATGTAAAAAGGAAGAGCCGGAATGGATAGAAGCTTTATGTACAAGTCTTGAGAAGCATGAAGAACACCAGTTAAGAAGTGATAAATTATATTTATATTATACACAGAAAGGCAGATGTATGTATTCCGGTGAGCCGATCGATCTGGAAGATTTATGGGATAATACAAAGTATGATATTGATCATATTTACCCACAGTCTAAAACGATGGATGATAGTCTGAAGAACCGGGTACTGGTAAAAAAAGAATACAATGCGAAAAAATCAGATACTTATCCGATCGCAGCAGACATTCAAAAGAAAATGATGCCATTTTGGAAATCCCTTTTGACAGGAGGATTTGTTCCAAAAGAAAAATATGACCGCCTGATTCGGAATAATCCTCTGGATGCCAATGAACTGGCAGGATTTATTGAGCGTCAGATCGTTGAAACGCGACAGAGTACAAAAGCTGTTGCTGAAATTTTAAAGAAAATTCTTCCTGATACGGAAATTGTTTATGTGAAGGCAAAGACAGTTTCAAAATTCAGGCAGGATTTTGATTTTATTAAAGTGAGGGACATGAATGATCTTCATCATGCAAAAGATGCTTACCTGAATATTGTTGTAGGAAATGTTTATTTTGTAAAATTCACAAAAAATGCAGGCTGGTTTGTGAAAGAGAATCCGGGGCGAACATATAATCTTGAAAAAATGTTTATATGGGATGTCGCGAGAGATGGAGAAATCGCCTGGAAAGCGGGAAAGAGTGGCTCTATTGTTCAGGTCAGAGCCATGATGGAGAAGAATCATATTCTTGTGACGCGTCGATCCTATGAAGTAAAAGGTGGATTATTTGATCAGCAGATTCTGAAAAAAGGAAAGGGGCAGGTGCCGGTCAAAGAAAGTGATGAACGATTGCGGGATATCGGAAAATACGGAGGATATAATAAGGCAGCAGGAGCTTATTTTATGCTTGTAAGCTCAAAAGATAAGAAAGGAAAAGAGCAGAGAACGATTGAGTTCGTACCAATTTATCTAAAAGACAGAGTGGAAAAAGATATGGAAAGTGCCAGAAACTATCTGATGGAAGAACGTGGATTGAGAGAGCCGAAAATACTGATCAAAAAGATTAAAATTGATACTTTATTTAAAGTCGATGGATTTTATATGTGGCTTTCTGGAAGAACTAGTAATCAGTTGATTTTTAAAGGTGCAAATCAACTGATTTTATCAAAAGAGGATATGAAAACTTTAAAAAAAGTAGTGAAATATATTCAGAGACAGAAAGAAGATAAGAATGTAAAGATCAGTGTGCGTGATGGAATAACAGAAGAAGAGTTGCTAAAGCTTTATGAGACATTTTTAGATAAGATCCGGCACAGTATTTATGGGGTGCGACTCTCTTCACAGGAAAAAACGCTGGTCAATGGAAAAGAGAAATTTATTGATCTCTCCGTTGAAGCAAAGTGTCAGGTGTTGTATGAAATTCTGCATTTATTCCAGTGTCAGAGTGGAGCATCAAATCTGAAAATGATCGGAGGTCCGGCAAGTGCAGGAATCCTGGTCATGAATAATAATATCAGTAAATGTAAAAATATTTCTATTGTCAATCAGTCTCCTACAGGAATTTATGAAAAAGAGATTGATCTTTTAAGAGTATGA
PROTEIN sequence
Length: 1342
MGKGYYVGLDMGTGSVGWAVTDESYQILRRHGKAMWGVRLFESAKTAEERRMFRTGRRRLDRRGWRIEILQEIFAEEISRVDPGFFLRMKESKYYPEDKRDIQGNCPELPYTLFVDKTFTDKDFHKKYPTIYHLRKMLMETEDTPDMRLVYLALHHMMKHRGHFLLSGDISQVTEFKNTFNQFIENIRNEEMDFEIELDESAVQMIEETLKDKNLTRSAKKSKLVKGLNAKNVRDKAFLTLLSGGTVKLSDLFGMEELNEGERPKISFADNGYEEYAAVVEMELGELYYIVESAKAVYDWAILSDILGGSTSISDAKVRAYEKHKADLKYLKAVVKEYFPKEVYNAVFVESSDKLNNYPAYIGMTKKNGKKVSLEGKRCSREEFMDFLKKNIVVKLPDEEAKMYLQSELEKDSFLPKQVNKDNGVIPYQVHKYELKKILDNLGDKIPFLKENAEKIEKLFSFRIPYYVGPLRTGNGENSKFAWAERKSTEKIYPWNFENVIDVEQSAENFIRRMTNKCTYLIGEDVLPKDSLLYSKFMVLNELNNLRLDGQKISVELKQKIYRDVFCRSRKVTQKKLKSYLIREGIAGKNVELTGIDGDFKGSLTAYHDFKEKLTGVELTQKEKEEIILNIVLFGDDKKLLKQRLKKKFPQLTEKQINTVTALSYKGWGRLSKKLLEEVTVPAPETGEVWNIITALWETNDNFMQLLSKEYQFSDRIEEFNEEKADPEVSYQTIEDLYVSPAVKRQIWQTLQIIQEIEKVMGEKPKRVFVEMAREKQENKRTESRKKTLSDLYKKCKKEEPEWIEALCTSLEKHEEHQLRSDKLYLYYTQKGRCMYSGEPIDLEDLWDNTKYDIDHIYPQSKTMDDSLKNRVLVKKEYNAKKSDTYPIAADIQKKMMPFWKSLLTGGFVPKEKYDRLIRNNPLDANELAGFIERQIVETRQSTKAVAEILKKILPDTEIVYVKAKTVSKFRQDFDFIKVRDMNDLHHAKDAYLNIVVGNVYFVKFTKNAGWFVKENPGRTYNLEKMFIWDVARDGEIAWKAGKSGSIVQVRAMMEKNHILVTRRSYEVKGGLFDQQILKKGKGQVPVKESDERLRDIGKYGGYNKAAGAYFMLVSSKDKKGKEQRTIEFVPIYLKDRVEKDMESARNYLMEERGLREPKILIKKIKIDTLFKVDGFYMWLSGRTSNQLIFKGANQLILSKEDMKTLKKVVKYIQRQKEDKNVKISVRDGITEEELLKLYETFLDKIRHSIYGVRLSSQEKTLVNGKEKFIDLSVEAKCQVLYEILHLFQCQSGASNLKMIGGPASAGILVMNNNISKCKNISIVNQSPTGIYEKEIDLLRV*