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L3_072_000M1_scaffold_2357_24

Organism: L3_072_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 20
Location: 24452..27898

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 1147.0
  • Bit_score: 1479
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCZ6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 1147.0
  • Bit_score: 1479
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 1123.0
  • Bit_score: 994
  • Evalue 2.10e-287

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Taxonomy

Clostridium sp. CAG:226 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3447
GTGACAAACCCGCTTATACAAATACTTGACAGGCATCCGGAATACACAAGGCTGCGGGACGCTATGGTAAATGGCGAAGGCCCTGCAGGAGTATTCGGCCTTGGAGAAAGCCACAAGGGGCATATAGCCGCCGCACTGTCAACAGGCAGGGCGGTATTGCTGGTTGCGCCAAACGAGGTGGCGGCGGTAAAGCTGCATGACGACATCGCCTGCTACGATATACCCTGCGCCCACTTCCCGACCAGGGAGATACCCCTGTCCGGCAAGGGCTTTGCCGCCCGTGACAGCATAGAGGAACGAAGGGTAGCGGTGCTGTCTGCACTTGCCGCCGGCAAGACCATGACGGTGGTGACATGCATACAGGCGCTGATGCAGCGCACCGTGGCCCCGGAGATAATCAAAAACAGCCTGCACAGCTATGAGGCGGGGCAGACCATAGAACCCCGGGATATGGTATCGGAGCTTGTTATGGCGGGCTATGAGAGGGTTGACGTATGCGAGGCGCCGGGGCAGGTATGCCTCCGCGGCGGCTATGTTGACGTATATCCCATCGCCGCTGAAAATCCTGTGCGTATAGAGTTTTTTGGCGATGAGATAGATACGCTCAGGATATACGATCCGCTTACACAGCGCTCTGTGGATAATGTGGACCACATAGACGTCCCTCCGGCTACCGAGATGCCCATAACAGACGAGGCAAGAGCGCGGGCGCTGAAGCTTCTCAAAAAGCGCAAGGCGGAGGAACTGGCCTCGGCGCTGGAGGAGGGGGGCAGGCCGGATAATTCAGTTGCCCTGCTGCCTCTGTTTTACCCCGGGGAAACCACGCTTTTTGACTATATAGACAAGGACTGGATAATACTCATAGACGAGCCGGCCCGCCTTGAGGAAAGCGGAAAGATAGCCTATCAGGAGTTCCTCGAGGGCGTATCCTCGCTTATGCAGGCGGGCGAGATACAGCCGGAGCAGGCCAACCTTACGGTATCCCCCCTTGAAACCATCAAGCGCATGGATACCAGAAGGACCGCCATGATGTTCGCCCTGACCCGCAGCTACGGCCTTATAGGGCAGAGGTGCATATTCAGATTCGATACACGGCCGGTTTCGAGATACGTAGGCCGGGAGGAGCTGCTGGCCGAGGATATAGAGGCGTGGAAAAAGAGCAATACAAGCGTTCTGATATACGCCGGTACCCACGCCAAAAGGCTTCAGGACAGACTGCTGGATTCAAACCACATAGTACCGATAAAGGAAAAGCTGGACCGGGACATTGTGCCGGGGGAGGTGCTGATAATAGAGCAGCAGCTGAACCACGGCTTCGAGTACCCGGAGCTTTCCCTTGCGGTAGTCACGGAAAACGAGCTTTACGGAGCCGAAAACCGAAGGCCTGTGGACAATAAGAAAAAGCGCAGGAAGCCGCAGCTGGTGTTCAGCGAGCTGAACGTGGGCGACCTTGTGGTCCATGAGCTTCATGGCATAGGTCGGTTCGTAGGCGTTGAGACGCTCACGGTAGGCGGCGTACAGAAGGATTATCTGCATCTTGTCTATTCCGGCGGCGATAAGCTGTACATACCTACGGACCAGCTGGACCGGGTGCAGAAGTACATCGGCGGCGGAGATGATGAGGGTACGCAGCGCCTTTCAAAGCTGGGCAGCGGCGAATGGCAGAAAACCGTATCCAGGACCCGCGACAGCGTAAAGAAGCTGGCCTTCGACCTTGTGCGTCTTTACGGCGAGAGGCAGAAGCGCAGGGGCTTTAAGTTTTCGCCGGATACCCCTTGGCAGAGAAAGCTGGAGGATAGCTTTCCGTATGAGCCTACGCCGGATCAGCTCACAAGCATTCAGGAGATAAAGGCGGACATGGAGAGCGACAAGGTGATGGACCGCCTGCTCTGCGGCGATGTGGGCTATGGTAAGACCGAAGTAGCGCTCAGGGCTGCCTTTAAGGCAGTGATGGACGGCAAGCAGTGCGCAATGCTTGTGCCTACAACTATACTTGCCCAGCAGCATTACAATACCATAGCTGCCAGGTTCGATGGCTTCCCCGTGAAGGTGGAACTGCTCTCCCGCTTTAAGACCCCCAAGGAGGAGGAAAAGATAATCGAGGGATTGCAAAGCGGCAGCGTGGACATGGTGGTGGGCACTCATAAGCTGCTTTCAAAGAGCGTAAAGTTCAAGGATCTGGGCCTGCTGATAATAGACGAGGAGCAGCGCTTCGGCGTAGGCCATAAGGAGCAGATAAAGAACATACGCCAGTCCGTGGACGTGCTGACGCTTTCCGCCACGCCTATCCCGCGGACGCTGCACATGTCCATGACGGGCATACGCGATATGTCCGTGATAGAGACGCCGCCCTCCCAGCGCTATCCCGTGCAGACGTATGTGATGGAATACAGCGATTCTGTAATACGTGAGGCCATACTGAAGGAGATTGGACGCGGCGGGCAGGTATACTTCGTATATAACAACGTCCGCAGTATGGAGCAGTTCGCGGGAAGGCTCAGGGAGCTGGTGCCGGAGGCCAGAGTGTGCTTTGCTAACGGGCAGATGAACGAGCGGGTGCTTGAAAAGACCATGCTGGAATTCATGGATCACAAGTACGACGTTTTGCTTTGCAGCACCATAATAGAGAGCGGACTGGATATGCAGAACGTGAACACGATAATAATATACGACGCGGACACCATGGGCCTATCCCAGCTTTATCAGCTCAGGGGCCGCGTGGGCCGCGGAGTGCGGCTTGGTTATGCCTACCTTACATACAGGCCAAACAAGGCGATGAGCGAAACGGCAGAAAAGCGCCTCATAGCCATACGGGAGTTTACCCAGTTTGGCTCCGGCTTTAAGATAGCGTTGAGGGATCTTGAGATACGCGGAGCAGGAAACCTTCTGGGACCGGAGCAGCACGGCCATATGGAGGCGATAGGCTACGATCTGTACTGCAAGATAGTTGACAGCGCAGTCCGGGAGGCAAAGGGAGAGGAGCTGCCAAAGGACATAGATACAGTTGTGGATATACCCATTTCCGCCAATATTCCAAAGAGCTATATTCCGAGGGAAGCGGAGCGGCTTTCCATGTACAAGCGCATCGCATTCATTGCGGCACAGGCAGACGTGTACGACGTACAGGACGAACTAATCGACCGCTACGGAGACATACCCGAGGAGGTGCAGAACCTCATATTCATCGCCCTTATCAAGGCGGAAGCGCAGCGGGCCTATATACAGCGGCTTATGGTGCGGGACGGGGAGGTGCGTATAGTGTTTGACCCGGAGGCGCCCATGGACGGCGCCAGGCTGTTTGCAGCCGCAAACAACATAGCAGGCGCGGCCATGCTGCCCGAGGAAGTGCCCACAATAGTCATACGCCGGCCCAAGTCCGATGTGAAAAAACTGTGCAGTGAGCTGACACAGATTGTTTACATGCTGTCGGATTGCATCATAAAGTGA
PROTEIN sequence
Length: 1149
VTNPLIQILDRHPEYTRLRDAMVNGEGPAGVFGLGESHKGHIAAALSTGRAVLLVAPNEVAAVKLHDDIACYDIPCAHFPTREIPLSGKGFAARDSIEERRVAVLSALAAGKTMTVVTCIQALMQRTVAPEIIKNSLHSYEAGQTIEPRDMVSELVMAGYERVDVCEAPGQVCLRGGYVDVYPIAAENPVRIEFFGDEIDTLRIYDPLTQRSVDNVDHIDVPPATEMPITDEARARALKLLKKRKAEELASALEEGGRPDNSVALLPLFYPGETTLFDYIDKDWIILIDEPARLEESGKIAYQEFLEGVSSLMQAGEIQPEQANLTVSPLETIKRMDTRRTAMMFALTRSYGLIGQRCIFRFDTRPVSRYVGREELLAEDIEAWKKSNTSVLIYAGTHAKRLQDRLLDSNHIVPIKEKLDRDIVPGEVLIIEQQLNHGFEYPELSLAVVTENELYGAENRRPVDNKKKRRKPQLVFSELNVGDLVVHELHGIGRFVGVETLTVGGVQKDYLHLVYSGGDKLYIPTDQLDRVQKYIGGGDDEGTQRLSKLGSGEWQKTVSRTRDSVKKLAFDLVRLYGERQKRRGFKFSPDTPWQRKLEDSFPYEPTPDQLTSIQEIKADMESDKVMDRLLCGDVGYGKTEVALRAAFKAVMDGKQCAMLVPTTILAQQHYNTIAARFDGFPVKVELLSRFKTPKEEEKIIEGLQSGSVDMVVGTHKLLSKSVKFKDLGLLIIDEEQRFGVGHKEQIKNIRQSVDVLTLSATPIPRTLHMSMTGIRDMSVIETPPSQRYPVQTYVMEYSDSVIREAILKEIGRGGQVYFVYNNVRSMEQFAGRLRELVPEARVCFANGQMNERVLEKTMLEFMDHKYDVLLCSTIIESGLDMQNVNTIIIYDADTMGLSQLYQLRGRVGRGVRLGYAYLTYRPNKAMSETAEKRLIAIREFTQFGSGFKIALRDLEIRGAGNLLGPEQHGHMEAIGYDLYCKIVDSAVREAKGEELPKDIDTVVDIPISANIPKSYIPREAERLSMYKRIAFIAAQADVYDVQDELIDRYGDIPEEVQNLIFIALIKAEAQRAYIQRLMVRDGEVRIVFDPEAPMDGARLFAAANNIAGAAMLPEEVPTIVIRRPKSDVKKLCSELTQIVYMLSDCIIK*