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L3_072_000M1_scaffold_5298_22

Organism: L3_072_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 20
Location: 9481..10254

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 257.0
  • Bit_score: 498
  • Evalue 4.10e-138
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 258.0
  • Bit_score: 429
  • Evalue 6.20e-118
DNA-directed RNA polymerase subunit alpha n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DB00_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 257.0
  • Bit_score: 498
  • Evalue 2.90e-138

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Taxonomy

Firmicutes bacterium CAG:176 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 774
GTGCAGCATGAGTTCTCCACCATCCCCGGTGTGAAGGAGGACGTGACGGAGATCGTTCTGAACGTGAAAAATCTGCTGACGAAGCTGCACAGCGACGCTGTCAAGACCGTGTTTATCGAGGCGGCCGGACCCTGCGAGGTCACGGCTGGCGATATCAAGACTGACGGCGAGGTGGAGGTCCTGAATCCCGAGCTGCACATTGCAACGCTGGATGTGGGCGCCACTCTGAGCATGGAGATCACCTTGAGCCACGGCCGCGGCTATGTCTCCGCCGACAAGAACAAGGCGGCGCGACCCGGCGTCATCGGCGTGATCCCCATCGACAGTATCTATACCCCCGTGTACAAGGTCAACTACACTGTGGAGAGCACCCGTGTGGGCGCTTCCAGCGACTACGATAAGCTGACGCTGGAGGTCTGGACCGACACCACCATCGCTGCCCGCGATGCGGTGTCCCTGGGCGCCAAGATCCTCTGCGACCATTTTGCCCTGTTCACCGACCTGTCCGATACGCTGGGCGATAAGTCCACCGTGGTGGAGAAGGCGCAGGACTCCAAGGACAAGATGCTGGAGCTGACCATCGAGGAACTGGATCTGTCTGTACGCAGCTTCAACTGCCTCAAGCGCGCCAACATCAACACCGTCGAGGACTTGATCTCCAAGACCGAGGACGAGATGATGAAGGTACGCAATCTGGGACGCAAGTCCCTGGAGGAAGTCATCAACAAGCTGGCGATGATGGGCCTGTCCCTGGCCAGCGAAGACAACAACTAA
PROTEIN sequence
Length: 258
VQHEFSTIPGVKEDVTEIVLNVKNLLTKLHSDAVKTVFIEAAGPCEVTAGDIKTDGEVEVLNPELHIATLDVGATLSMEITLSHGRGYVSADKNKAARPGVIGVIPIDSIYTPVYKVNYTVESTRVGASSDYDKLTLEVWTDTTIAARDAVSLGAKILCDHFALFTDLSDTLGDKSTVVEKAQDSKDKMLELTIEELDLSVRSFNCLKRANINTVEDLISKTEDEMMKVRNLGRKSLEEVINKLAMMGLSLASEDNN*