ggKbase home page

L3_072_000M1_scaffold_4817

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_4817_1
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..421)
DNA (420bp) protein (140aa)
Integrase core domain protein n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FGF3_9FIRM
Integrase core domain protein {ECO:0000313|EMBL:CCY04080.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
L3_072_000M1_scaffold_4817_2
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(626..3277)
DNA (2652bp) protein (884aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G412_9PROT
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CDE22169.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
L3_072_000M1_scaffold_4817_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3414..3866)
DNA (453bp) protein (151aa)
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:KIE45296.1}; EC=5.3.1.6 {ECO:0000313|EMBL:KIE45296.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BS00_9CLOT
L3_072_000M1_scaffold_4817_4
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

Not on your lists

comp(3891..4895)
DNA (1005bp) protein (335aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
Sua5 superfamily-related protein n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6HKZ4_9FIRM
putative translation factor
L3_072_000M1_scaffold_4817_5
unknown

Not on your lists

4942..5676
DNA (735bp) protein (245aa)

This feature has no annotations

L3_072_000M1_scaffold_4817_6
unknown

Not on your lists

comp(5682..6077)
DNA (396bp) protein (132aa)

This feature has no annotations

L3_072_000M1_scaffold_4817_7
unknown

Not on your lists

comp(6151..6282)
DNA (132bp) protein (44aa)

This feature has no annotations

L3_072_000M1_scaffold_4817_8
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

Not on your lists

comp(6312..7628)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GQB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26585.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
Fmu (Sun) domain-containing protein
L3_072_000M1_scaffold_4817_9
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7625..8260)
DNA (636bp) protein (212aa)
Entner-Doudoroff aldolase (EC:4.1.3.16 4.1.2.14)
Putative KHG/KDPG aldolase n=1 Tax=Blautia sp. KLE 1732 RepID=U2D4Z9_9FIRM
Putative KHG/KDPG aldolase {ECO:0000313|EMBL:ERI97884.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_072_000M1_scaffold_4817_10
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8332..8724)
DNA (393bp) protein (131aa)
Cytidine deaminase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KNQ4_9FIRM
Cytidine deaminase {ECO:0000313|EMBL:CDE78044.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
cytidine deaminase
L3_072_000M1_scaffold_4817_11
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

Not on your lists


comp(8845..9126)
DNA (282bp) protein (94aa)
30S ribosomal protein S18 n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6HK53_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
SSU ribosomal protein S18P
L3_072_000M1_scaffold_4817_12
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

Not on your lists

comp(9150..9485)
DNA (336bp) protein (112aa)
Single-stranded DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GPN1_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
ssb_2; helix-destabilizing protein
Displaying 12 items

View Taxonomy