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L3_072_000M1_scaffold_3164

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_3164_1
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1244
DNA (1242bp) protein (414aa)
Phosphomannomutase n=1 Tax=Clostridium intestinale URNW RepID=U2PYU7_9CLOT
Phosphoglucomutase {ECO:0000313|EMBL:KGK86985.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
L3_072_000M1_scaffold_3164_2
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1314..3284
DNA (1971bp) protein (657aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
Transketolase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G3N1_9PROT
transketolase
L3_072_000M1_scaffold_3164_3
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3284..3859
DNA (576bp) protein (192aa)
5'-nucleotidase YfbR (EC:3.1.3.5)
Metal dependent phosphohydrolase n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5VWW5_9DELT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CCZ94920.1}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
L3_072_000M1_scaffold_3164_4
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4107..5018)
DNA (912bp) protein (304aa)
EDD domain protein, DegV family n=1 Tax=Catonella morbi ATCC 51271 RepID=V2XHL6_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:ESL01634.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
EDD domain protein, DegV family
L3_072_000M1_scaffold_3164_5
unknown

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5393..7729
DNA (2337bp) protein (779aa)

This feature has no annotations

L3_072_000M1_scaffold_3164_6
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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7833..8834
DNA (1002bp) protein (334aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XJR5_CALS8
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABP67150.1}; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 /; Tp8T 6331).;"
L3_072_000M1_scaffold_3164_7
Firmicutes bacterium CAG:449, Firmicutes, Bacteria

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8847..9749
DNA (903bp) protein (301aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Firmicutes bacterium CAG:449 RepID=R6RAI2_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDC44880.1}; TaxID=1263023 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:449.;"
sugar ABC transporter ATP-binding protein
L3_072_000M1_scaffold_3164_8
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10347..11168)
DNA (822bp) protein (274aa)
Putative HTH-type transcriptional regulator ChbR n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G539_9PROT
Putative HTH-type transcriptional regulator ChbR {ECO:0000313|EMBL:CDE21843.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_3164_9
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11354..12388
DNA (1035bp) protein (345aa)
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Aldose 1-epimerase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SDI1_PEDSD
L3_072_000M1_scaffold_3164_10
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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12580..13413
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0S2I8_BUTPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL33955.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
Displaying 10 items

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