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L3_072_000M1_scaffold_3501

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_3501_1
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..372
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6SXV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC60261.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
hypothetical protein
L3_072_000M1_scaffold_3501_2
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(557..1441)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Fusobacterium nucleatum subsp. nucleatum ATCC 23726 RepID=D5RBE9_FUSNC
Uncharacterized protein {ECO:0000313|EMBL:EFG95838.1}; TaxID=525283 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp. nucleatum ATCC 23726.;"
hypothetical protein
L3_072_000M1_scaffold_3501_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1702..3504)
DNA (1803bp) protein (601aa)
L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L-fucose isomerase n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MMN6_9FIRM
L3_072_000M1_scaffold_3501_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3628..4476
DNA (849bp) protein (283aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1QYZ5_CLOBU
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEP52679.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
AraC family transcriptional regulator
L3_072_000M1_scaffold_3501_5
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5188..5445)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0ESC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG37813.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Copper chaperone
L3_072_000M1_scaffold_3501_6
Firmicutes bacterium CAG:345, Firmicutes, Bacteria

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comp(6050..9223)
DNA (3174bp) protein (1058aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:345 RepID=R6Y2P0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD22911.1}; TaxID=1263020 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:345.;"
hypothetical protein
L3_072_000M1_scaffold_3501_7
Firmicutes bacterium CAG:449, Firmicutes, Bacteria

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9359..10195
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:449 RepID=R6RF50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC41561.1}; TaxID=1263023 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:449.;"
AraC family transcriptional regulator
L3_072_000M1_scaffold_3501_8
unknown

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comp(10431..10961)
DNA (531bp) protein (177aa)

This feature has no annotations

L3_072_000M1_scaffold_3501_9
unknown

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comp(11139..11450)
DNA (312bp) protein (104aa)

This feature has no annotations

L3_072_000M1_scaffold_3501_10
unknown

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comp(11468..11653)
DNA (186bp) protein (62aa)

This feature has no annotations

L3_072_000M1_scaffold_3501_11
Clostridium sp. CAG:288, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11664..12032)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:288 RepID=R7FLL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE15506.1}; TaxID=1262791 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:288.;"
L3_072_000M1_scaffold_3501_12
unknown

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comp(12208..12345)
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 12 items

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