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L3_072_000M1_scaffold_3597

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_3597_1
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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2..589
DNA (588bp) protein (196aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GLD4_9FIRM
L3_072_000M1_scaffold_3597_2
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(850..1764)
DNA (915bp) protein (305aa)
Alpha-L-glutamate ligase RimK family n=1 Tax=Clostridium sp. CAG:349 RepID=R6XSR9_9CLOT
Alpha-L-glutamate ligase RimK family {ECO:0000313|EMBL:CDD09342.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
RimK family alpha-L-glutamate ligase
L3_072_000M1_scaffold_3597_3
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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comp(1761..2279)
DNA (519bp) protein (173aa)
Transporter n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GWS1_9FIRM
Transporter {ECO:0000313|EMBL:CDB25721.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
transporter
L3_072_000M1_scaffold_3597_4
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2800..4200
DNA (1401bp) protein (467aa)
MATE efflux family protein n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FHS6_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCY04398.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
MATE efflux family protein
L3_072_000M1_scaffold_3597_5
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4276..5097)
DNA (822bp) protein (274aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A7VRD3_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDC05260.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_072_000M1_scaffold_3597_6
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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comp(5104..5919)
DNA (816bp) protein (272aa)
Chromosome segregation ATPase n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GNU3_9FIRM
Chromosome segregation ATPase {ECO:0000313|EMBL:CDB26055.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
chromosome segregation ATPase
L3_072_000M1_scaffold_3597_7
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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6066..6884
DNA (819bp) protein (273aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
Cobalt ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GKQ9_9FIRM
cobalt import ATP-binding protein CbiO 1
L3_072_000M1_scaffold_3597_8
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

Not on your lists

6875..7723
DNA (849bp) protein (283aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
cbiO2; cobalt transporter ATP-binding protein CbiO (EC:3.6.3.-)
Cobalt import ATP-binding protein CbiO 1 n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6HJ76_9FIRM
L3_072_000M1_scaffold_3597_9
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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7807..8565
DNA (759bp) protein (253aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GXV4_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000313|EMBL:CDB26051.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L3_072_000M1_scaffold_3597_10
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8562..9293
DNA (732bp) protein (244aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Thermincola potens (strain JR) RepID=D5XAB7_THEPJ
L3_072_000M1_scaffold_3597_11
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9375..10226
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PWS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ20663.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L3_072_000M1_scaffold_3597_12
Candidatus Methanomethylophilus alvus, Candidatus Methanomethylophilus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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10254..12083
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomethylophilus alvus Mx1201 RepID=M9S949_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI84881.1}; TaxID=1236689 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanomethylophilus.;" source="Candidatus Methanomethylophilus alvus Mx1201.;"
Displaying 12 items

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