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L3_072_000M1_scaffold_2000

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_2000_1
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1579)
DNA (1578bp) protein (526aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M1V0_9FIRM
L3_072_000M1_scaffold_2000_2
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1720..4875)
DNA (3156bp) protein (1052aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
addA; ATP-dependent nuclease subunit A (EC:3.6.1.-)
ATP-dependent helicase/nuclease subunit A n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FU20_9PROT
L3_072_000M1_scaffold_2000_3
Acidaminococcus sp. CAG:917, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4859..7840)
DNA (2982bp) protein (994aa)
ATP-dependent nuclease subunit AddB n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GU85_9FIRM
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000313|EMBL:CDE72854.1}; TaxID=1262688 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus sp. CAG:917.;"
ATP-dependent nuclease subunit B
L3_072_000M1_scaffold_2000_4
unknown

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7933..8877
DNA (945bp) protein (315aa)

This feature has no annotations

L3_072_000M1_scaffold_2000_5
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9017..10555)
DNA (1539bp) protein (513aa)
FAD dependent oxidoreductase n=1 Tax=Clostridium sp. CAG:245 RepID=R6B369_9CLOT
FAD dependent oxidoreductase {ECO:0000313|EMBL:CDA58723.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
dehydrogenase
L3_072_000M1_scaffold_2000_6
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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comp(10548..11777)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GYK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26326.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
hypothetical protein
L3_072_000M1_scaffold_2000_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11838..12524)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B450_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50350.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_072_000M1_scaffold_2000_8
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12542..14095)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5APX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX42802.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hypothetical protein
L3_072_000M1_scaffold_2000_9
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14563..15663)
DNA (1101bp) protein (367aa)
Surface antigen BspA-like n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ET74_9FIRM
Surface antigen BspA-like {ECO:0000313|EMBL:CDE05810.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L3_072_000M1_scaffold_2000_10
unknown

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16101..18188
DNA (2088bp) protein (696aa)

This feature has no annotations

L3_072_000M1_scaffold_2000_11
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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18189..18803
DNA (615bp) protein (205aa)
thiamine pyrophosphokinase (EC:2.7.6.2)
Thiamine diphosphokinase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LQX7_9FIRM
Thiamine diphosphokinase {ECO:0000313|EMBL:CDB88320.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_072_000M1_scaffold_2000_12
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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18902..19054
DNA (153bp) protein (51aa)
Stage V sporulation protein AD n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D7C0_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:CCX74724.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
spoVAD; stage V sporulation protein AD
Displaying 12 items

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