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L3_072_000M1_scaffold_2235

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_2235_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..147
DNA (147bp) protein (49aa)
Threonine synthase {ECO:0000313|EMBL:EFB76648.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EFB76648.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Threonine synthase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKZ0_9FIRM
L3_072_000M1_scaffold_2235_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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175..744
DNA (570bp) protein (190aa)
Ser/Thr phosphatase family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKY9_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EFB76647.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted phosphohydrolase
L3_072_000M1_scaffold_2235_3
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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799..1029
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A2B8_MAHA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE96165.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L3_072_000M1_scaffold_2235_4
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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1099..2424
DNA (1326bp) protein (442aa)
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GTU7_9FIRM
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:CDB25144.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
RNA methyltransferase, TrmA family
L3_072_000M1_scaffold_2235_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2740..4527
DNA (1788bp) protein (596aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450.;"
ade; adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T1K1_CLOSG
L3_072_000M1_scaffold_2235_6
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(4581..5381)
DNA (801bp) protein (267aa)
Transcriptional regulator AraC family n=1 Tax=Firmicutes bacterium CAG:449 RepID=R6R7P8_9FIRM
AraC family transcriptional regulator
Tax=GWF2_Clostridiales_36_10_curated
L3_072_000M1_scaffold_2235_7
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

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5542..7824
DNA (2283bp) protein (761aa)
pyruvate formate-lyase (EC:2.3.1.54)
Pyruvate formate-lyase id=4467399 bin=GWF2_Lentisphaerae_49_21 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=GWF2_Lentisphaerae_44_16_curated
L3_072_000M1_scaffold_2235_8
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8044..9000
DNA (957bp) protein (319aa)
Glutamyl aminopeptidase M42 family n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N3C6_9FIRM
Glutamyl aminopeptidase M42 family {ECO:0000313|EMBL:CCY92061.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
glutamyl aminopeptidase M42 family
L3_072_000M1_scaffold_2235_9
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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9016..10755
DNA (1740bp) protein (580aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU000675};; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
Beta-galactosidase n=2 Tax=Paenibacillus RepID=F5LP71_9BACL
beta-galactosidase
L3_072_000M1_scaffold_2235_10
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10843..14166
DNA (3324bp) protein (1108aa)
Ig domain protein group 2 domain protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DGE8_CLOTH
dockerin type I cellulosome protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:ABN53027.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_072_000M1_scaffold_2235_11
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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14332..15033
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GKA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB24900.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
hypothetical protein
L3_072_000M1_scaffold_2235_12
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15047..16051
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R7F595_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE09806.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
L3_072_000M1_scaffold_2235_13
Streptomyces sp. NTK 937, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(16129..17631)
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Streptomyces sulphureus RepID=UPI00036670E3
Uncharacterized protein {ECO:0000313|EMBL:KDQ70243.1}; TaxID=1487711 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NTK 937.;"
hypothetical protein
Displaying 13 items

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