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L3_072_000M1_scaffold_2369

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_2369_1
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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1..1029
DNA (1029bp) protein (343aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
Primosomal protein N n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6HM55_9FIRM
PriA; primosomal protein N'
L3_072_000M1_scaffold_2369_2
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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1044..1502
DNA (459bp) protein (153aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6H0M8_9FIRM
L3_072_000M1_scaffold_2369_3
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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1507..2421
DNA (915bp) protein (305aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6HM45_9FIRM
L3_072_000M1_scaffold_2369_4
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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2414..3640
DNA (1227bp) protein (409aa)
rsmB; ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-)
Sun protein n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6HM15_9FIRM
Sun protein {ECO:0000313|EMBL:CDB26992.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
L3_072_000M1_scaffold_2369_5
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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3637..4683
DNA (1047bp) protein (349aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GZ62_9FIRM
ribosomal RNA large subunit methyltransferase N
L3_072_000M1_scaffold_2369_6
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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4676..5542
DNA (867bp) protein (289aa)
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GZ58_9FIRM
Putative ribosome biogenesis GTPase RsgA {ECO:0000313|EMBL:CDB26984.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
ribosome small subunit-dependent gtpase a
L3_072_000M1_scaffold_2369_7
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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5556..6203
DNA (648bp) protein (216aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
rpe; Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GNF2_9FIRM
L3_072_000M1_scaffold_2369_8
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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comp(6476..6661)
DNA (186bp) protein (62aa)
50S ribosomal protein L28 n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6H0J1_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
rpmB; ribosomal protein L28
L3_072_000M1_scaffold_2369_9
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6877..7227
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G2N2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE21410.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
alkaline shock protein
L3_072_000M1_scaffold_2369_10
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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7247..8887
DNA (1641bp) protein (547aa)
Dihydroxyacetone kinase family protein n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GZ51_9FIRM
Dihydroxyacetone kinase family protein {ECO:0000313|EMBL:CDB26979.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
DAK2 domain-containing protein
L3_072_000M1_scaffold_2369_11
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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8972..10966
DNA (1995bp) protein (665aa)
DNA helicase RecG n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GNE6_9FIRM
DNA helicase RecG {ECO:0000313|EMBL:CDB26978.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
ATP-dependent DNA helicase RecG
L3_072_000M1_scaffold_2369_12
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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10983..13112
DNA (2130bp) protein (710aa)
ComEC n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6HLZ9_9FIRM
ComEC {ECO:0000313|EMBL:CDB26977.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
ComEC/rec2-like protein
L3_072_000M1_scaffold_2369_13
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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13203..13391
DNA (189bp) protein (63aa)
50S ribosomal protein L32 n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K591_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
50S ribosomal protein L32
L3_072_000M1_scaffold_2369_14
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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13451..14494
DNA (1044bp) protein (348aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
Phosphate acyltransferase n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K6G5_9FIRM
fatty acid/phospholipid synthesis protein PlsX
L3_072_000M1_scaffold_2369_15
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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14501..15169
DNA (669bp) protein (223aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
Ribonuclease 3 n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BVS0_9FIRM
rnc; ribonuclease III
L3_072_000M1_scaffold_2369_16
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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15303..16967
DNA (1665bp) protein (555aa)
Chromosome partition protein Smc n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GJP8_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
smc; chromosome segregation protein Smc
L3_072_000M1_scaffold_2369_17
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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16957..18801
DNA (1845bp) protein (615aa)
Chromosome partition protein Smc n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GJP8_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
smc; chromosome segregation protein Smc
L3_072_000M1_scaffold_2369_18
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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18822..19721
DNA (900bp) protein (300aa)
Signal recognition particle receptor FtsY n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6HI87_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
signal recognition particle-docking protein FtsY
L3_072_000M1_scaffold_2369_19
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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19890..21095
DNA (1206bp) protein (402aa)
Signal recognition particle protein n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GWN6_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
signal recognition particle protein
Displaying 19 items

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