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L3_072_000M1_scaffold_2533

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_2533_1
unknown

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comp(2..358)
DNA (357bp) protein (119aa)

This feature has no annotations

L3_072_000M1_scaffold_2533_2
unknown

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581..1210
DNA (630bp) protein (210aa)

This feature has no annotations

L3_072_000M1_scaffold_2533_3
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1328..1537)
DNA (210bp) protein (70aa)
XRE family transcriptional regulator n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FI90_9FIRM
XRE family transcriptional regulator {ECO:0000313|EMBL:CCY04528.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
Transcriptional regulator, Cro/CI family
L3_072_000M1_scaffold_2533_4
unknown

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1637..1849
DNA (213bp) protein (71aa)

This feature has no annotations

L3_072_000M1_scaffold_2533_5
unknown

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2106..2375
DNA (270bp) protein (90aa)

This feature has no annotations

L3_072_000M1_scaffold_2533_6
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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comp(2274..3371)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=S2LKB9_9FIRM
hypothetical protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
L3_072_000M1_scaffold_2533_7
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3605..5005
DNA (1401bp) protein (467aa)
Predicted Zn-dependent proteases TLDD ortholog n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WH89_9FIRM
Predicted Zn-dependent proteases TLDD ortholog {ECO:0000313|EMBL:CDD03506.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
putative Zn-dependent protease-like protein
L3_072_000M1_scaffold_2533_8
Clostridium sp. CAG:307, Tenericutes, Bacteria

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5019..6305
DNA (1287bp) protein (429aa)
Putative Zn-dependent protease-like protein n=1 Tax=Clostridium sp. CAG:307 RepID=R7GGI8_9CLOT
Putative Zn-dependent protease-like protein {ECO:0000313|EMBL:CDE26514.1}; TaxID=1262795 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:307.;"
peptidase PmbA
L3_072_000M1_scaffold_2533_9
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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6332..6922
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UPR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72787.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L3_072_000M1_scaffold_2533_10
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7118..7930
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G2T3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE20302.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
ABC transporter substrate-binding protein
L3_072_000M1_scaffold_2533_11
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8013..8735
DNA (723bp) protein (241aa)
Polar amino acid ABC transporter inner membrane subunit n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G066_9PROT
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:CDE20301.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
polar amino acid ABC transporter inner membrane subunit
L3_072_000M1_scaffold_2533_12
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8722..9636
DNA (915bp) protein (305aa)
ABC transporter n=1 Tax=Clostridium sp. CAG:632 RepID=R5KBJ9_9CLOT
ABC transporter {ECO:0000313|EMBL:CCY58556.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
ABC transporter ATP-binding protein
L3_072_000M1_scaffold_2533_13
Dialister succinatiphilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(9770..10417)
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Dialister succinatiphilus YIT 11850 RepID=H1CXH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO64004.1}; TaxID=742743 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister succinatiphilus YIT 11850.;"
putative metal-dependent hydrolase
L3_072_000M1_scaffold_2533_14
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(10414..11217)
DNA (804bp) protein (268aa)
HAD superfamily hydrolase (Cof-subfamily) (EC:3.6.1.-)
Cof-like hydrolase n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6U1X6_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CDC74101.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
L3_072_000M1_scaffold_2533_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11404..11700
DNA (297bp) protein (99aa)
membrane protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B79F55
Uncharacterized protein {ECO:0000313|EMBL:EGN34398.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_072_000M1_scaffold_2533_16
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11763..12728
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PKY4_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EHO85718.1}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium infirmum F0142.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L3_072_000M1_scaffold_2533_17
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12732..13442
DNA (711bp) protein (237aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PKY3_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EHO85717.1}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium infirmum F0142.;"
L3_072_000M1_scaffold_2533_18
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13435..14280
DNA (846bp) protein (282aa)
Zinc transport system permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4H1_9FIRM
Zinc transport system permease {ECO:0000313|EMBL:EGN44076.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC-type Mn2+/Zn2+ transport systems, permease components
L3_072_000M1_scaffold_2533_19
unknown

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14277..14810
DNA (534bp) protein (178aa)

This feature has no annotations

L3_072_000M1_scaffold_2533_20
unknown

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14822..15466
DNA (645bp) protein (215aa)

This feature has no annotations

L3_072_000M1_scaffold_2533_21
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15482..16063
DNA (582bp) protein (194aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVL0_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDO61010.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
MSM (multiple sugar metabolism) operon regulatory protein
Displaying 21 items

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